RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 PHYHIPQ92561 330 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 FAM46BQ96A09 425 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 C12orf43Q96C57 262 aaKnown RBP6.88□□□□□ -1.31
SF1-218ENST00000489544 C1orf159Q96HA4 380 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 C1orf147Q96MC9 270 aaPredicted RBP6.88□□□□□ -1.31
SF1-218ENST00000489544 FUNDC2Q9BWH2 189 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 SSBP3Q9BWW4 388 aaPredicted RBP6.88□□□□□ -1.31
SF1-218ENST00000489544 MRPS26Q9BYN8 205 aaKnown RBP6.88□□□□□ -1.31
SF1-218ENST00000489544 NAA50Q9GZZ1 169 aaKnown RBP6.88□□□□□ -1.31
SF1-218ENST00000489544 SLITRK2Q9H156 845 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 BANF2Q9H503 90 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 YAE1D1Q9NRH1 226 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 RASL12Q9NYN1 266 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 CLN8Q9UBY8 286 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 SSR3Q9UNL2 185 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 ABCA1O95477 2261 aa6.88□□□□□ -1.31
SF1-218ENST00000489544 MALRD1Q5VYJ5 2156 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 TMEM82A0PJX8 343 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 NKX6-3A6NJ46 265 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 B4DSR2 109 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 SIRPB1O00241 398 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 SIGLEC5O15389 551 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 NDUFA2O43678 99 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 CD5LO43866 347 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 HAND1O96004 215 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 HEXAP06865 529 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 MSMBP08118 114 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 SLC2A2P11168 524 aaPredicted RBP6.87□□□□□ -1.31
SF1-218ENST00000489544 FOSL1P15407 271 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 MYL9P24844 172 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 FGF9P31371 208 aaPredicted RBP6.87□□□□□ -1.31
SF1-218ENST00000489544 SDC2P34741 201 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 ALDH3B2P48448 385 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 CAPZA1P52907 286 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 FGF12P61328 243 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 IL13RA1P78552 427 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 MXD1Q05195 221 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 PLA2G7Q13093 441 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 C1orf100Q5SVJ3 147 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 ATPAF1Q5TC12 328 aaPredicted RBP6.87□□□□□ -1.31
SF1-218ENST00000489544 GLT8D1Q68CQ7 371 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 IL17RELQ6ZVW7 336 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 NLRC3Q7RTR2 1065 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 SLC36A1Q7Z2H8 476 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 BIVMQ86UB2 503 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 ASCC1Q8N9N2 400 aaKnown RBP6.87□□□□□ -1.31
SF1-218ENST00000489544 OR13F1Q8NGS4 319 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 SLC25A28Q96A46 364 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 TMEM186Q96B77 213 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 CPNE2Q96FN4 548 aaPredicted RBP6.87□□□□□ -1.31
SF1-218ENST00000489544 SDSLQ96GA7 329 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 S100A13Q99584 98 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 CHST6Q9GZX3 395 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 METTL9Q9H1A3 318 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 HIF1ANQ9NWT6 349 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 ING3Q9NXR8 418 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 KAAG1Q9UBP8 84 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 TEP1Q99973 2627 aaKnown RBP6.87□□□□□ -1.31
SF1-218ENST00000489544 ZFHX3Q15911 3703 aa6.87□□□□□ -1.31
SF1-218ENST00000489544 LOC105371242A0A075B767 164 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 TRAV1-2A0A0B4J238 106 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 A0A0G2JK05 382 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 A8MXK9 166 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 HSPB6O14558 160 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 GEMIN2O14893 280 aaKnown RBP6.86□□□□□ -1.31
SF1-218ENST00000489544 SLC22A1O15245 554 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 NDUFB3O43676 98 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 AIREO43918 545 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 PSPNO60542 156 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 ZNF737O75373 536 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 FOXH1O75593 365 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 CRTAPO75718 401 aaPredicted RBP6.86□□□□□ -1.31
SF1-218ENST00000489544 OR2H2O95918 312 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 AVPP01185 164 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 CSTBP04080 98 aaKnown RBP6.86□□□□□ -1.31
SF1-218ENST00000489544 VSIG8P0DPA2 414 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 CD37P11049 281 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 ZNF44P15621 663 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 NDUFB7P17568 137 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 RAB3BP20337 219 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 GALP22466 123 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 GABRR1P24046 479 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 HTR2CP28335 458 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 MTNR1BP49286 362 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 DLX1P56177 255 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 NCS1P62166 190 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 PAX2Q02962 417 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 PRB3Q04118 309 aaPredicted RBP6.86□□□□□ -1.31
SF1-218ENST00000489544 ZNF146Q15072 292 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 TAF9Q16594 264 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 GPR107Q5VW38 600 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 ELP2Q6IA86 826 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 FAM166AQ6J272 317 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 FAHD2BQ6P2I3 314 aaPredicted RBP6.86□□□□□ -1.31
SF1-218ENST00000489544 Q6P435 159 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 BRICD5Q6PL45 260 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 C17orf107Q6ZR85 190 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 SLC16A12Q6ZSM3 486 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 BTN2A1Q7KYR7 527 aa6.86□□□□□ -1.31
SF1-218ENST00000489544 RTN4RL2Q86UN3 420 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms