RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 PDCD1LG2Q9BQ51 273 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 ZNF649Q9BS31 505 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 ZNF696Q9H7X3 374 aa11.4□□□□□ -0.58
VTI1A-206ENST00000489142 TRBV2A0A0J9YWF9 115 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 A0A1B0GUS0 222 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 SIRPB1O00241 398 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 MPZL2O60487 215 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 PSPNO60542 156 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 WBP4O75554 376 aaKnown RBP11.39□□□□□ -0.59
VTI1A-206ENST00000489142 FADS2O95864 444 aaKnown RBP11.39□□□□□ -0.59
VTI1A-206ENST00000489142 CYB5AP00167 134 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 PRKACBP22694 351 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 GTF2A1P52655 376 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-206ENST00000489142 RPL15P61313 204 aaKnown RBP11.39□□□□□ -0.59
VTI1A-206ENST00000489142 PDZK1IP1Q13113 114 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 GRK1Q15835 563 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 MIDNQ504T8 468 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 LPCAT4Q643R3 524 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 CRIP3Q6Q6R5 217 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 FAM58AQ8N1B3 248 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 DYNAPQ8N1N2 210 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 ZSCAN4Q8NAM6 433 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-206ENST00000489142 OR4S1Q8NGB4 309 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 CNIH3Q8TBE1 160 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 Q96MT0 163 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 HEXA-AS1Q9H8Q6 139 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 NEK6Q9HC98 313 aa11.39□□□□□ -0.59
VTI1A-206ENST00000489142 SMPD3Q9NY59 655 aaPredicted RBP11.39□□□□□ -0.59
VTI1A-206ENST00000489142 C17orf98A8MV24 154 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 ZFPL1O95159 310 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 ARG1P05089 322 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 ZNF728P0DKX0 622 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 LGALS4P56470 323 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 RAB40BQ12829 278 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 LRRC75BQ2VPJ9 315 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 HIST2H2BDQ6DRA6 164 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 XAF1Q6GPH4 301 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 Q8IYB0 196 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 SYS1Q8N2H4 156 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 ZNF555Q8NEP9 628 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 OR5R1Q8NH85 324 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 OR5AK2Q8NH90 309 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 PPP1R35Q8TAP8 253 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 TSEN15Q8WW01 171 aaKnown RBP11.38□□□□□ -0.59
VTI1A-206ENST00000489142 STMN2Q93045 179 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 SPSB1Q96BD6 273 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 MRPL48Q96GC5 212 aaKnown RBP11.38□□□□□ -0.59
VTI1A-206ENST00000489142 SNX22Q96L94 193 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 NKX3-1Q99801 234 aaPredicted RBP11.38□□□□□ -0.59
VTI1A-206ENST00000489142 CITED1Q99966 193 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 ZCCHC4Q9H5U6 513 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 GSTK1Q9Y2Q3 226 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 SIGLEC9Q9Y336 463 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 RPL36Q9Y3U8 105 aaKnown RBP11.38□□□□□ -0.59
VTI1A-206ENST00000489142 KIAA2026Q5HYC2 2103 aa11.38□□□□□ -0.59
VTI1A-206ENST00000489142 MEGF8Q7Z7M0 2845 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 hCG_1809904A0A1W2PP81 198 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 A0A1W2PPE2 198 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 A0A1W2PR64 198 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 A0A1W2PRV1 198 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 HCKP08631 526 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 LIMS3P0CW19 117 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 LIMS4P0CW20 117 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 JUNBP17275 347 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-206ENST00000489142 OR3A1P47881 315 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 SOX2P48431 317 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 ETV1P50549 477 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 PROK1P58294 105 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 SCN1BQ07699 218 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 IL18R1Q13478 541 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 ZSCAN26Q16670 478 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 LDLRAD2Q5SZI1 272 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 OR2G6Q5TZ20 316 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 TREML4Q6UXN2 200 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 CYGBQ8WWM9 190 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 RGP1Q92546 391 aaPredicted RBP11.37□□□□□ -0.59
VTI1A-206ENST00000489142 ZNF714Q96N38 554 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 INPP5EQ9NRR6 644 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 ING3Q9NXR8 418 aa11.37□□□□□ -0.59
VTI1A-206ENST00000489142 TMEM212A6NML5 194 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 CHST1O43916 411 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 OR2H2O95918 312 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 IGHV1-8P0DP01 117 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 PEX2P28328 305 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 TGFBR2P37173 567 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 RAB13P51153 203 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 GBX2P52951 348 aaPredicted RBP11.36□□□□□ -0.59
VTI1A-206ENST00000489142 DYNC1I2Q13409 638 aaKnown RBP11.36□□□□□ -0.59
VTI1A-206ENST00000489142 SLC35E4Q6ICL7 350 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 BAIAP2L2Q6UXY1 529 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 TRAPPC6BQ86SZ2 158 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 OR51A2Q8NGJ7 313 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 COMMD4Q9H0A8 199 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 MEGF9Q9H1U4 602 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 HMG20AQ9NP66 347 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 EXOSC4Q9NPD3 245 aaKnown RBP11.36□□□□□ -0.59
VTI1A-206ENST00000489142 DHDHQ9UQ10 334 aa11.36□□□□□ -0.59
VTI1A-206ENST00000489142 VWFP04275 2813 aa11.35□□□□□ -0.59
VTI1A-206ENST00000489142 hADV38S2A0JD32 116 aa11.35□□□□□ -0.59
VTI1A-206ENST00000489142 MEGF11A6BM72 1044 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms