RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 FAM58AQ8N1B3 248 aa13.99□□□□□ -0.17
HMG20B-212ENST00000487894 ASCC1Q8N9N2 400 aaKnown RBP13.99□□□□□ -0.17
HMG20B-212ENST00000487894 OR51A2Q8NGJ7 313 aa13.99□□□□□ -0.17
HMG20B-212ENST00000487894 FAM216AQ8WUB2 273 aa13.99□□□□□ -0.17
HMG20B-212ENST00000487894 TMEM106AQ96A25 262 aa13.99□□□□□ -0.17
HMG20B-212ENST00000487894 ANKRD60Q9BZ19 345 aa13.99□□□□□ -0.17
HMG20B-212ENST00000487894 VCX3BQ9H321 246 aa13.99□□□□□ -0.17
HMG20B-212ENST00000487894 TRBV5-5A0A0J9YX44 114 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 RNASEK-C17orf49H0YIS7 233 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 HAND1O96004 215 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 CDK1P06493 297 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 CHRM2P08172 466 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 CALCBP10092 127 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 RAB3AP20336 220 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 MYF6P23409 242 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 TAS2R43P59537 309 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 RPS11P62280 158 aaKnown RBP eCLIP13.98□□□□□ -0.17
HMG20B-212ENST00000487894 RPL31P62899 125 aaKnown RBP13.98□□□□□ -0.17
HMG20B-212ENST00000487894 GUCA2AQ02747 115 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 BAMBIQ13145 260 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 KLRD1Q13241 179 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 ZNF146Q15072 292 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 FIP1L1Q6UN15 594 aaKnown RBP13.98□□□□□ -0.17
HMG20B-212ENST00000487894 IZUMO2Q6UXV1 221 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 C1orf122Q6ZSJ8 110 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 SAXO1Q8IYX7 474 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 NANOGP1Q8N7R0 232 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 GHSRQ92847 366 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 TNFRSF14Q92956 283 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 DUX5Q96PT3 197 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 PRDM13Q9H4Q3 707 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 UNKLQ9H9P5 680 aaKnown RBP13.98□□□□□ -0.17
HMG20B-212ENST00000487894 SEBOXQ9HB31 216 aaPredicted RBP13.98□□□□□ -0.17
HMG20B-212ENST00000487894 HMG20AQ9NP66 347 aa13.98□□□□□ -0.17
HMG20B-212ENST00000487894 PAK1IP1Q9NWT1 392 aaPredicted RBP13.98□□□□□ -0.17
HMG20B-212ENST00000487894 TMEM82A0PJX8 343 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 ATP6V1G2O95670 118 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 PRTN3P24158 256 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 DUSP1P28562 367 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 SNU13P55769 128 aaKnown RBP13.97□□□□□ -0.17
HMG20B-212ENST00000487894 ZNF273Q14593 569 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 YIF1BQ5BJH7 314 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 SPIN3Q5JUX0 258 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 RNLSQ5VYX0 342 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 C17orf107Q6ZR85 190 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 OR8H2Q8N162 312 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 ZSCAN4Q8NAM6 433 aaPredicted RBP13.97□□□□□ -0.17
HMG20B-212ENST00000487894 OR4M1Q8NGD0 313 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 SGCDQ92629 289 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 ORAI1Q96D31 301 aa13.97□□□□□ -0.17
HMG20B-212ENST00000487894 ZMAT3Q9HA38 289 aaKnown RBP13.97□□□□□ -0.17
HMG20B-212ENST00000487894 PNMA8CA0A1B0GUJ8 204 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 GABRPO00591 440 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 ACTG1P63261 375 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 RIPK1Q13546 671 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 SLC9A3R2Q15599 337 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 Q499Y3 187 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 TMEM200BQ69YZ2 307 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 OR52N4Q8NGI2 321 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 SNX22Q96L94 193 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 METTL8Q9H825 291 aaKnown RBP13.96□□□□□ -0.17
HMG20B-212ENST00000487894 RHOFQ9HBH0 211 aa13.96□□□□□ -0.17
HMG20B-212ENST00000487894 A0A0U1RQK1 487 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 PTGES3LE9PB15 166 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 CLDN34H7C241 214 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 PSPNO60542 156 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 RNASE1P07998 156 aaKnown RBP13.95□□□□□ -0.18
HMG20B-212ENST00000487894 TMEM225BP0DP42 221 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 CCL3L1P16619 93 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 IGFBP3P17936 291 aaPredicted RBP13.95□□□□□ -0.18
HMG20B-212ENST00000487894 HSPA13P48723 471 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 SLC35A2P78381 396 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 BLMHQ13867 455 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 HCP5Q6MZN7 132 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 Q6YL49 198 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 TCF23Q7RTU1 214 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 C11orf42Q8N5U0 333 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 MYDGFQ969H8 173 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 CPNE2Q96FN4 548 aaPredicted RBP13.95□□□□□ -0.18
HMG20B-212ENST00000487894 OR14A2Q96R54 314 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 NKX3-1Q99801 234 aaPredicted RBP13.95□□□□□ -0.18
HMG20B-212ENST00000487894 MND1Q9BWT6 205 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 CDCA4Q9BXL8 241 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 CHST6Q9GZX3 395 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 EXOSC4Q9NPD3 245 aaKnown RBP13.95□□□□□ -0.18
HMG20B-212ENST00000487894 SCN3BQ9NY72 215 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 ERGIC3Q9Y282 383 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 GSTK1Q9Y2Q3 226 aa13.95□□□□□ -0.18
HMG20B-212ENST00000487894 LSM2Q9Y333 95 aaKnown RBP13.95□□□□□ -0.18
HMG20B-212ENST00000487894 TRBV5-7A0A0A0MS05 114 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 SIRPB1O00241 398 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 MAGEB3O15480 346 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 HOXA3O43365 443 aaPredicted RBP13.94□□□□□ -0.18
HMG20B-212ENST00000487894 ALDOBP05062 364 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 CD1AP06126 327 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 MELTFP08582 738 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 CELP19835 753 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 FSTP19883 344 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 GABRR1P24046 479 aa13.94□□□□□ -0.18
HMG20B-212ENST00000487894 OR3A1P47881 315 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms