RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 PI3P19957 117 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 COX5AP20674 150 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 GNG3P63215 75 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 ZNF660Q6AZW8 331 aaPredicted RBP17.46■□□□□ 0.38
HPS3-206ENST00000486530 TMEM65Q6PI78 240 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 OR8H3Q8N146 312 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 BOD1Q96IK1 185 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 ZNF442Q9H7R0 627 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 TMEM165Q9HC07 324 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 DECR2Q9NUI1 292 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 LHX6Q9UPM6 363 aa17.46■□□□□ 0.38
HPS3-206ENST00000486530 SPTBN2O15020 2390 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 FAM25EA8MYX2 175 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 SMPD2O60906 423 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 RP2O75695 350 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 CELA3BP08861 270 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 SLC25A4P12235 298 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 IDH3GP51553 393 aaPredicted RBP17.45■□□□□ 0.38
HPS3-206ENST00000486530 SUPT4H1P63272 117 aaKnown RBP17.45■□□□□ 0.38
HPS3-206ENST00000486530 MPV17LQ2QL34 196 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 BRICD5Q6PL45 260 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 MYPOPQ86VE0 399 aaPredicted RBP17.45■□□□□ 0.38
HPS3-206ENST00000486530 ZNF573Q86YE8 665 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 DHRS9Q9BPW9 319 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 MFFQ9GZY8 342 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 ARL6Q9H0F7 186 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 DCHS1Q96JQ0 3298 aa17.45■□□□□ 0.38
HPS3-206ENST00000486530 ANKRD34BA5PLL1 514 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 CFDP00746 253 aaPredicted RBP17.44■□□□□ 0.38
HPS3-206ENST00000486530 PDGFAP04085 211 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 GLRA1P23415 457 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 HOXC12P31275 282 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 SLC9A3R2Q15599 337 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 OR2T2Q6IF00 324 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 C11orf87Q6NUJ2 197 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 VWA1Q6PCB0 445 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 GSG1LQ6UXU4 331 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 C3P1Q6ZMU1 363 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 BATF2Q8N1L9 274 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 PPP1R1CQ8WVI7 109 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 SEC22AQ96IW7 307 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 PLK3Q9H4B4 646 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 RAB18Q9NP72 206 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 MTCH1Q9NZJ7 389 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 A0A1W2PR80 420 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 LILRA1O75019 489 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 CTSDP07339 412 aaPredicted RBP17.44■□□□□ 0.38
HPS3-206ENST00000486530 PPP1CBP62140 327 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 PDCD1Q15116 288 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 SLC22A25Q6T423 547 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 DHRS11Q6UWP2 260 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 LINC00596Q86U02 117 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 ZNF546Q86UE3 836 aa17.44■□□□□ 0.38
HPS3-206ENST00000486530 C5orf51A6NDU8 294 aa17.43■□□□□ 0.38
HPS3-206ENST00000486530 RPS2P15880 293 aaKnown RBP17.43■□□□□ 0.38
HPS3-206ENST00000486530 SERPINF1P36955 418 aa17.43■□□□□ 0.38
HPS3-206ENST00000486530 SPATA46Q5T0L3 261 aa17.43■□□□□ 0.38
HPS3-206ENST00000486530 C6orf183Q5T699 404 aa17.43■□□□□ 0.38
HPS3-206ENST00000486530 HAGHLQ6PII5 290 aaPredicted RBP17.43■□□□□ 0.38
HPS3-206ENST00000486530 Q6ZS92 163 aa17.43■□□□□ 0.38
HPS3-206ENST00000486530 EXTL1Q92935 676 aa17.43■□□□□ 0.38
HPS3-206ENST00000486530 PKIBQ9C010 78 aa17.43■□□□□ 0.38
HPS3-206ENST00000486530 RCC2Q9P258 522 aaKnown RBP17.43■□□□□ 0.38
HPS3-206ENST00000486530 FRYQ5TBA9 3013 aa17.42■□□□□ 0.38
HPS3-206ENST00000486530 K7EM74 188 aa17.42■□□□□ 0.38
HPS3-206ENST00000486530 IL32P24001 234 aa17.42■□□□□ 0.38
HPS3-206ENST00000486530 CYCSP99999 105 aaKnown RBP17.42■□□□□ 0.38
HPS3-206ENST00000486530 IL24Q13007 206 aa17.42■□□□□ 0.38
HPS3-206ENST00000486530 NMES1Q9C002 83 aa17.42■□□□□ 0.38
HPS3-206ENST00000486530 PLSCR4Q9NRQ2 329 aa17.42■□□□□ 0.38
HPS3-206ENST00000486530 MSRB2Q9Y3D2 182 aa17.42■□□□□ 0.38
HPS3-206ENST00000486530 ESPL1Q14674 2120 aa17.42■□□□□ 0.38
HPS3-206ENST00000486530 A0A0D9SG52 128 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 FAM221AA4D161 298 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 EEF1E1-BLOC1S5C9J1V9 151 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 F8VVB4 439 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 F8VWA3 439 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 SYNGR1O43759 233 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 CBR1P16152 277 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 CA6P23280 308 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 ZNF345Q14585 488 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 CLLU1Q5K131 121 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 ZNF585AQ6P3V2 769 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 TNFSF18Q9UNG2 199 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 LINC00862A6NCI5 91 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 TUBAL3A6NHL2 446 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 KNG1P01042 644 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 RAB14P61106 215 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 ANKRD55Q3KP44 614 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 PLEKHN1Q494U1 663 aaPredicted RBP17.41■□□□□ 0.38
HPS3-206ENST00000486530 LRRC37A5PQ49AS3 106 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 Q6ZS49 121 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 SPACA3Q8IXA5 215 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 RBMXL3Q8N7X1 1067 aaKnown RBP17.41■□□□□ 0.38
HPS3-206ENST00000486530 MARS2Q96GW9 593 aaKnown RBP17.41■□□□□ 0.38
HPS3-206ENST00000486530 RTL8AQ9BWD3 113 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 OR2J1Q9GZK6 312 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 RHOFQ9HBH0 211 aa17.41■□□□□ 0.38
HPS3-206ENST00000486530 CHMP1AQ9HD42 196 aaPredicted RBP17.41■□□□□ 0.38
HPS3-206ENST00000486530 DKK4Q9UBT3 224 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms