RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 ATPAF1Q5TC12 328 aaPredicted RBP9.5□□□□□ -0.89
NUP50-216ENST00000486184 GPR107Q5VW38 600 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ELP2Q6IA86 826 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ASCL4Q6XD76 172 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 C1QL2Q7Z5L3 287 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 GLCCI1Q86VQ1 547 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 OSR2Q8N2R0 312 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ZNF561Q8N587 486 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 FAM216BQ8N7L0 139 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ASCC1Q8N9N2 400 aaKnown RBP9.5□□□□□ -0.89
NUP50-216ENST00000486184 TMEM185AQ8NFB2 350 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 OR4D6Q8NGJ1 314 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ST8SIA4Q92187 359 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 GAFA1Q96PS6 74 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 CENPOQ9BU64 300 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 LPAR2Q9HBW0 351 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 MAST4O15021 2626 aa9.5□□□□□ -0.89
NUP50-216ENST00000486184 ABCA2Q9BZC7 2435 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 DVL1O14640 695 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 SIGLEC5O15389 551 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 BPNT1O95861 308 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 TGFAP01135 160 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 TFF1P04155 84 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 TFAP2AP05549 437 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 MSMBP08118 114 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 ARSBP15848 533 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 NDUFB7P17568 137 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 GABRR1P24046 479 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 SDC2P34741 201 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 CEBPDP49716 269 aaPredicted RBP9.49□□□□□ -0.89
NUP50-216ENST00000486184 SEC61A1P61619 476 aaKnown RBP9.49□□□□□ -0.89
NUP50-216ENST00000486184 LCN2P80188 198 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 ZNF146Q15072 292 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 P2RY14Q15391 338 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 HES5Q5TA89 166 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 CD276Q5ZPR3 534 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 ZNF788Q6ZQV5 615 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 LINC00596Q86U02 117 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 BIVMQ86UB2 503 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 PPP1R35Q8TAP8 253 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 H1FXQ92522 213 aaKnown RBP9.49□□□□□ -0.89
NUP50-216ENST00000486184 SDSLQ96GA7 329 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 RNF167Q9H6Y7 350 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 IL36RNQ9UBH0 155 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 CTSZQ9UBR2 303 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 SLC25A10Q9UBX3 287 aaPredicted RBP9.49□□□□□ -0.89
NUP50-216ENST00000486184 STEAP1Q9UHE8 339 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 ZNF222Q9UK12 451 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 ST3GAL6Q9Y274 331 aa9.49□□□□□ -0.89
NUP50-216ENST00000486184 SHISA3A0PJX4 238 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 SMIM30A4D0T7 59 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 IFITM5A6NNB3 132 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 NOTOA8MTQ0 251 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 SIRPB1O00241 398 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 DEGS1O15121 323 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 SLC22A1O15245 554 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 PHF1O43189 567 aaPredicted RBP9.48□□□□□ -0.89
NUP50-216ENST00000486184 MGMTP16455 207 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 DUSP1P28562 367 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 RBM11P57052 281 aaKnown RBP9.48□□□□□ -0.89
NUP50-216ENST00000486184 OR10A3P58181 314 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 COL10A1Q03692 680 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 IL13RA2Q14627 380 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 PIGYQ3MUY2 71 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 WDR25Q64LD2 544 aaPredicted RBP9.48□□□□□ -0.89
NUP50-216ENST00000486184 FAM166AQ6J272 317 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 LIAT1Q6ZQX7 453 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 LYPD6Q86Y78 171 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 ANKRD13BQ86YJ7 626 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 CLVS1Q8IUQ0 354 aaPredicted RBP9.48□□□□□ -0.89
NUP50-216ENST00000486184 CD177Q8N6Q3 437 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 CHST4Q8NCG5 386 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 ZNRF1Q8ND25 227 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 OR51T1Q8NGJ9 327 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 KCNG3Q8TAE7 436 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 FAM46BQ96A09 425 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 MSI2Q96DH6 328 aaKnown RBP9.48□□□□□ -0.89
NUP50-216ENST00000486184 MRPS24Q96EL2 167 aaKnown RBP9.48□□□□□ -0.89
NUP50-216ENST00000486184 GFI1Q99684 422 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 TMEM59Q9BXS4 323 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 SELENOIQ9C0D9 397 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 FAM234AQ9H0X4 552 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 BANF2Q9H503 90 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 MED13LQ71F56 2210 aa9.48□□□□□ -0.89
NUP50-216ENST00000486184 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.47□□□□□ -0.898e-12■■■■■ 36
NUP50-216ENST00000486184 LOC105371242A0A075B767 164 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 TRAV20A0A0B4J274 112 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 A0A1B0GW55 424 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 A8MXK9 166 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 H3BUI4 141 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 AIPO00170 330 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 TNFRSF13BO14836 293 aaPredicted RBP9.47□□□□□ -0.89
NUP50-216ENST00000486184 CD5LO43866 347 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 OR7C1O76099 320 aaPredicted RBP9.47□□□□□ -0.89
NUP50-216ENST00000486184 MPIG6BO95866 241 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 ECDO95905 644 aaPredicted RBP9.47□□□□□ -0.89
NUP50-216ENST00000486184 OR2H2O95918 312 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DUX4L2P0CJ85 424 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DUX4L3P0CJ86 424 aa9.47□□□□□ -0.89
NUP50-216ENST00000486184 DUX4L4P0CJ87 422 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms