RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ERICH4A6NGS2 130 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 A6NLC8 198 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 J3QLW9 94 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 K7N7A8 449 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 ENSAO43768 121 aaKnown RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 XPNPEP2O43895 674 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 GATBO75879 557 aaKnown RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 KNG1P01042 644 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 ALDOBP05062 364 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 CCDC159P0C7I6 412 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 ZNF19P17023 458 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 IGFBP3P17936 291 aaPredicted RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 ATF1P18846 271 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 MYF6P23409 242 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 GLRA1P23415 457 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 PAX6P26367 422 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 C21orf33P30042 268 aaPredicted RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 HAAOP46952 286 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 COMPP49747 757 aaPredicted RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 RBP2P50120 134 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 DLX6P56179 175 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 IL13RA1P78552 427 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 BDH1Q02338 343 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 PDZK1IP1Q13113 114 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 C6orf141Q5SZD1 244 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 PLCXD3Q63HM9 321 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 HAGHLQ6PII5 290 aaPredicted RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 UNQ9370/PRO34162Q6UXP9 181 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 BAIAP2L2Q6UXY1 529 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 Q6ZPA2 131 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 C17orf107Q6ZR85 190 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 BTN2A1Q7KYR7 527 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 SLC36A1Q7Z2H8 476 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 FAM220AQ7Z4H9 259 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 ANGPTL5Q86XS5 388 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 C8orf59Q8N0T1 100 aaPredicted RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 PNKDQ8N490 385 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 ZNF561Q8N587 486 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 ZSCAN4Q8NAM6 433 aaPredicted RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 OR51A2Q8NGJ7 313 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 C17orf50Q8WW18 174 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 SPSB1Q96BD6 273 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 FGGYQ96C11 551 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 SMIM19Q96E16 107 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 MRPL48Q96GC5 212 aaKnown RBP4.69□□□□□ -1.66
CUX1-208ENST00000485792 TMEM80Q96HE8 168 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 CCDC140Q96MF4 163 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 WDFY2Q96P53 400 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 HIST1H2AAQ96QV6 131 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 CCL13Q99616 98 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 PDCD1LG2Q9BQ51 273 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 COMMD4Q9H0A8 199 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 FAM234AQ9H0X4 552 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 CNTD2Q9H8S5 307 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 GPR173Q9NS66 373 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 ZNF69Q9UC07 566 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 OR5V1Q9UGF6 321 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 POLDIP2Q9Y2S7 368 aa4.69□□□□□ -1.66
CUX1-208ENST00000485792 TRBV23-1A0A0A0MS06 115 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 TRBV2A0A0J9YWF9 115 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 hCG_1807616A0A1W2PRN6 198 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 MEX3AA1L020 520 aaKnown RBP4.68□□□□□ -1.66
CUX1-208ENST00000485792 RFPL4AA6NLU0 287 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 RFPL4AL1F8VTS6 287 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 M0R1W7 72 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 PIN1P1O15428 100 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 TCF21O43680 179 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 SULT1B1O43704 296 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 KDM4BO94953 1096 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 CDK1P06493 297 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 CGB3P0DN86 165 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 CGB7P0DN87 165 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 PRKACBP22694 351 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 PRTN3P24158 256 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 AZGP1P25311 298 aaKnown RBP4.68□□□□□ -1.66
CUX1-208ENST00000485792 ERP29P30040 261 aaKnown RBP4.68□□□□□ -1.66
CUX1-208ENST00000485792 PRDX2P32119 198 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 ECI1P42126 302 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 NPBWR2P48146 333 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 GBX2P52951 348 aaPredicted RBP4.68□□□□□ -1.66
CUX1-208ENST00000485792 GMFBP60983 142 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 FGF12P61328 243 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 KLRD1Q13241 179 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 SCGB2A2Q13296 93 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 GPR50Q13585 617 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 CNN3Q15417 329 aaKnown RBP4.68□□□□□ -1.66
CUX1-208ENST00000485792 SMIM21Q3B7S5 101 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 NHLRC3Q5JS37 347 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 BTNL3Q6UXE8 466 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 LHFPL2Q6ZUX7 228 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 SERPINA12Q8IW75 414 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 CDH26Q8IXH8 852 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 Q8IYB0 196 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.68□□□□□ -1.66
CUX1-208ENST00000485792 ZFP41Q8N8Y5 198 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 PNLDC1Q8NA58 520 aaKnown RBP4.68□□□□□ -1.66
CUX1-208ENST00000485792 ZNRF1Q8ND25 227 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 PXT1Q8NFP0 134 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 OR5T2Q8NGG2 359 aa4.68□□□□□ -1.66
CUX1-208ENST00000485792 OR51T1Q8NGJ9 327 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms