RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 MMP23AO75900 390 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 OR2T7P0C7T2 308 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 CALCBP10092 127 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 GABRR1P24046 479 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 PEX2P28328 305 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 POLR2IP36954 125 aaKnown RBP15.45■□□□□ 0.06
COL27A1-205ENST00000485397 NPBWR2P48146 333 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 ZNF91Q05481 1191 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 GRK1Q15835 563 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 MINOS1Q5TGZ0 78 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 REC114Q7Z4M0 266 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 OR4F17Q8NGA8 305 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 NDNFQ8TB73 568 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 MRAPQ8TCY5 172 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 OR4F4Q96R69 305 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 RBFOX1Q9NWB1 397 aaKnown RBP15.45■□□□□ 0.06
COL27A1-205ENST00000485397 LINC00312Q9Y6C7 94 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 MINOS1-NBL1R4GNA1 71 aa15.45■□□□□ 0.06
COL27A1-205ENST00000485397 SULT1C4O75897 302 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 SERPINA3P01011 423 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 BCL3P20749 454 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 HTR1FP30939 366 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 KIR3DL2P43630 455 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 VDAC2P45880 294 aaPredicted RBP15.44■□□□□ 0.06
COL27A1-205ENST00000485397 POU3F4P49335 361 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 SNU13P55769 128 aaKnown RBP15.44■□□□□ 0.06
COL27A1-205ENST00000485397 AMIGO2Q86SJ2 522 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 CCDC54Q8NEL0 328 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 SGCDQ92629 289 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 OCSTAMPQ9BR26 566 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 GABARAPL1Q9H0R8 117 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 TMEM133Q9H2Q1 129 aa15.44■□□□□ 0.06
COL27A1-205ENST00000485397 LOC107986453A0A1B0GWG9 222 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 FAM90A22PA8MWA6 464 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 ATP1B3P54709 279 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 TP53I3Q53FA7 332 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 BAIAP2L2Q6UXY1 529 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 ZDHHC13Q8IUH4 622 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 FAM58AQ8N1B3 248 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 RNF166Q96A37 237 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-205ENST00000485397 PHF21AQ96BD5 680 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 ADAT3Q96EY9 351 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-205ENST00000485397 CIB1Q99828 191 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 CLEC7AQ9BXN2 247 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 SEBOXQ9HB31 216 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-205ENST00000485397 NECAP2Q9NVZ3 263 aa15.43■□□□□ 0.06
COL27A1-205ENST00000485397 AURKAIP1Q9NWT8 199 aaPredicted RBP15.43■□□□□ 0.06
COL27A1-205ENST00000485397 IGKV1-9A0A0C4DH69 117 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 A0A1W2PRX2 142 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 CD24P25063 80 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 FASP25445 335 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 ATP6V1E1P36543 226 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 RBP2P50120 134 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 LOXL3P58215 753 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 ZNF85Q03923 595 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 Q8IYB0 196 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 ENTHD1Q8IYW4 607 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 OR4P4Q8NGL7 312 aa15.42■□□□□ 0.06
COL27A1-205ENST00000485397 TRBV2A0A0J9YWF9 115 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 SIRPB1O00241 398 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 MGST3O14880 152 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 ENTPD6O75354 484 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 PRKACAP17612 351 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 ATF1P18846 271 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 HTR1DP28221 377 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 OR3A1P47881 315 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 MTCP1P56278 107 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 P2RX3P56373 397 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 ISL1P61371 349 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 CD83Q01151 205 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 ZNF146Q15072 292 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 TRAPPC6BQ86SZ2 158 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 DNAAF1Q8NEP3 725 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 OR5AU1Q8NGC0 362 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 PP6455Q8WZ26 134 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 EME1Q96AY2 570 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 C10orf35Q96D05 121 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 ENOPH1Q9UHY7 261 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 GNG8Q9UK08 70 aa15.41■□□□□ 0.06
COL27A1-205ENST00000485397 DNAH3Q8TD57 4116 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 CYB5AP00167 134 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 ALDOBP05062 364 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 UBCP0CG48 685 aaKnown RBP15.4■□□□□ 0.06
COL27A1-205ENST00000485397 AZGP1P25311 298 aaKnown RBP15.4■□□□□ 0.06
COL27A1-205ENST00000485397 ERP29P30040 261 aaKnown RBP15.4■□□□□ 0.06
COL27A1-205ENST00000485397 PRAMEF5Q5TYX0 476 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 ZBTB49Q6ZSB9 765 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 FAM220AQ7Z4H9 259 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 ABHD12Q8N2K0 398 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 BCAS4Q8TDM0 211 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 RFT1Q96AA3 541 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 FGGYQ96C11 551 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 RIBC2Q9H4K1 309 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 GSTK1Q9Y2Q3 226 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 UBE2J1Q9Y385 318 aaPredicted RBP15.4■□□□□ 0.06
COL27A1-205ENST00000485397 AP4S1Q9Y587 144 aa15.4■□□□□ 0.06
COL27A1-205ENST00000485397 FAM172BPA6NC97 362 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 ALX3O95076 343 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 IGLL1P15814 213 aa15.39■□□□□ 0.05
COL27A1-205ENST00000485397 GDNFP39905 211 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms