RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 REM1O75628 298 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 TYMSP04818 313 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ELANEP08246 267 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF35P13682 527 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CD36P16671 472 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ATP6V1B2P21281 511 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 PSMA1P25786 263 aaKnown RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SSTR5P35346 364 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 MNDAP41218 407 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 PRKXP51817 358 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 POU3F1Q03052 451 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 TAL2Q16559 108 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 DUSP5Q16690 384 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 DEFB113Q30KQ7 82 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ATP6AP1LQ52LC2 224 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF627Q7L945 461 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 JAGN1Q8N5M9 183 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 OR51F2Q8NH61 342 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SDF2Q99470 211 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 S1PR3Q99500 378 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 P2RX4Q99571 388 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 TMEM208Q9BTX3 173 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 DSN1Q9H410 356 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 TMEM138Q9NPI0 162 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 TIGARQ9NQ88 270 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CLN6Q9NWW5 311 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 KLRF1Q9NZS2 232 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ING1Q9UK53 422 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 RCL1Q9Y2P8 373 aaKnown RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 HDGFL3Q9Y3E1 203 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CELSR3Q9NYQ7 3312 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 EFCAB9A8MZ26 197 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 VWC2LB2RUY7 222 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 M0QZK8 103 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CLIC1O00299 241 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 DCTN6O00399 190 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CDC40O60508 579 aaKnown RBP eCLIP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SERPINB7O75635 380 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 KRT75O95678 551 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 MAP2K4P45985 399 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 OR3A2P47893 321 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CX3CR1P49238 355 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 AQP5P55064 265 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 KRTAP10-9P60411 292 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 BTG1P62324 171 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF155Q12901 538 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 RPS27LQ71UM5 84 aaKnown RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF367Q7RTV3 350 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CCDC71Q8IV32 467 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 OR4K17Q8NGC6 315 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 FNDC8Q8TC99 324 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CPNE2Q96FN4 548 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ADOQ96SZ5 270 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SLC19A3Q9BZV2 496 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SDHAF2Q9NX18 166 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 DKKL1Q9UK85 242 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 NUP50Q9UKX7 468 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 OAZ3Q9UMX2 235 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 GOLT1BQ9Y3E0 138 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 PRRC2AP48634 2157 aaKnown RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 METTL15A6NJ78 407 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 PLPP3O14495 311 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 PGCP20142 388 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 AADACP22760 399 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CCKARP32238 428 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 GABRA3P34903 492 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 KIR2DS4P43632 304 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 HOXA1P49639 335 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 OR2B8PP59922 312 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 PAFAH1B2P68402 229 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 APOFQ13790 326 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ATXN7L3Q14CW9 347 aaPredicted RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 OR10J3Q5JRS4 329 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 DCST2Q5T1A1 773 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 GGNBP1Q5YKI7 109 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SSX6Q7RTT6 188 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 TMED4Q7Z7H5 227 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 GALNT10Q86SR1 603 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 DTX2Q86UW9 622 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 STPG2Q8N412 459 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SMIM20Q8N5G0 67 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 SCCPDHQ8NBX0 429 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 TMEM234Q8WY98 164 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 RAB3CQ96E17 227 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 PHB2Q99623 299 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 LINC00470Q9BZP3 86 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 POLR2J2Q9GZM3 115 aaKnown RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 MRPL18Q9H0U6 180 aaKnown RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 POLR2J3Q9H1A7 115 aaKnown RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 PATZ1Q9HBE1 687 aaKnown RBP4.47□□□□□ -1.69
CCDC39-205ENST00000485055 AMBNQ9NP70 447 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 ZNF226Q9NYT6 803 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 CALML5Q9NZT1 146 aa4.47□□□□□ -1.69
CCDC39-205ENST00000485055 APCP25054 2843 aa4.46□□□□□ -1.69
CCDC39-205ENST00000485055 NBPF19A0A087WUL8 3843 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 SERINC4A6NH21 518 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 RPL36A-HNRNPH2H7BZ11 118 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 AGTR1P30556 359 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 GNRHRP30968 328 aa4.46□□□□□ -1.7
CCDC39-205ENST00000485055 RFC3P40938 356 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms