RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TSEN15Q8WW01 171 aaKnown RBP11.37□□□□□ -0.59
VARS-225ENST00000482996 CHIAQ9BZP6 476 aa11.37□□□□□ -0.59
VARS-225ENST00000482996 HEXA-AS1Q9H8Q6 139 aa11.37□□□□□ -0.59
VARS-225ENST00000482996 SEBOXQ9HB31 216 aaPredicted RBP11.37□□□□□ -0.59
VARS-225ENST00000482996 DHDHQ9UQ10 334 aa11.37□□□□□ -0.59
VARS-225ENST00000482996 LRRC42Q9Y546 428 aa11.37□□□□□ -0.59
VARS-225ENST00000482996 E9PI62 339 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 SPRY1O43609 319 aaPredicted RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 ANGPTL7O43827 346 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 ZNF737O75373 536 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 HAND1O96004 215 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 IGHV4-59P01825 116 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 PIPP12273 146 aaPredicted RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 PRKACAP17612 351 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 BCL3P20749 454 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 SAA4P35542 130 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 IER3P46695 156 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 RPL15P61313 204 aaKnown RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 ADARB1P78563 741 aaKnown RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 CCDC58Q4VC31 144 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 RPL22L1Q6P5R6 122 aaKnown RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 GDPD3Q7L5L3 318 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 SERPINA12Q8IW75 414 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 ZSCAN4Q8NAM6 433 aaPredicted RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 RFT1Q96AA3 541 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 SNX22Q96L94 193 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 PDCD1LG2Q9BQ51 273 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 ZNF747Q9BV97 191 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 RBFOX1Q9NWB1 397 aaKnown RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 CHCHD3Q9NX63 227 aaKnown RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 EXOSC1Q9Y3B2 195 aaKnown RBP11.36□□□□□ -0.59
VARS-225ENST00000482996 PCDHGB5Q9Y5G0 923 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 HSPE1-MOB4S4R3N1 261 aa11.36□□□□□ -0.59
VARS-225ENST00000482996 A0A1B0GUS0 222 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 POM121CA8CG34 1229 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 DENRO43583 198 aaKnown RBP11.35□□□□□ -0.59
VARS-225ENST00000482996 SULT1B1O43704 296 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 ALX3O95076 343 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 CD2P06729 351 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 HCKP08631 526 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 GABRR1P24046 479 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 NPBWR2P48146 333 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 ETV1P50549 477 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 EDDM3BP56851 147 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 ERVFRD-1P60508 538 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 MIDNQ504T8 468 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 SPIN3Q5JUX0 258 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 OR8H2Q8N162 312 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 PNKDQ8N490 385 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 PARP16Q8N5Y8 322 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 PPP1R35Q8TAP8 253 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 DYRK2Q92630 601 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 TFAP2CQ92754 450 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 CPNE2Q96FN4 548 aaPredicted RBP11.35□□□□□ -0.59
VARS-225ENST00000482996 SPACA5Q96QH8 159 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 ANKRD60Q9BZ19 345 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 RHOFQ9HBH0 211 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 ZNRD1Q9P1U0 126 aa11.35□□□□□ -0.59
VARS-225ENST00000482996 DIMT1Q9UNQ2 313 aaKnown RBP11.35□□□□□ -0.59
VARS-225ENST00000482996 TMEM82A0PJX8 343 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 SH2D1BO14796 132 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 MAGEB3O15480 346 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 GPR137BO60478 399 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 KDM4BO94953 1096 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 CCL3L1P16619 93 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 MYF6P23409 242 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 OMGP23515 440 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 GTF2A1P52655 376 aaPredicted RBP11.34□□□□□ -0.59
VARS-225ENST00000482996 SNU13P55769 128 aaKnown RBP11.34□□□□□ -0.59
VARS-225ENST00000482996 RAG2P55895 527 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 MEF2CQ06413 473 aaPredicted RBP11.34□□□□□ -0.59
VARS-225ENST00000482996 EDDM3AQ14507 147 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 ZNF273Q14593 569 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 ZNF146Q15072 292 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 CDK5R1Q15078 307 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 GRK1Q15835 563 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 SHISA2Q6UWI4 295 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 GDPGP1Q6ZNW5 385 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 SAXO1Q8IYX7 474 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 OR5D18Q8NGL1 313 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 OR5R1Q8NH85 324 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 SGMS2Q8NHU3 365 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 GPR148Q8TDV2 347 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 TMEM80Q96HE8 168 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 BEX1Q9HBH7 125 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 HMG20AQ9NP66 347 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 IL36RNQ9UBH0 155 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 MMP24Q9Y5R2 645 aa11.34□□□□□ -0.59
VARS-225ENST00000482996 hADV38S2A0JD32 116 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 EFCAB10A6NFE3 127 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 NDUFA7O95182 113 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 ZNF728P0DKX0 622 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 TMEM225BP0DP42 221 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 CALCBP10092 127 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 RAB3AP20336 220 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 MDKP21741 143 aaPredicted RBP11.33□□□□□ -0.6
VARS-225ENST00000482996 COX7A1P24310 79 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 DUSP1P28562 367 aa11.33□□□□□ -0.6
VARS-225ENST00000482996 SOX2P48431 317 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms