RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 OR5AC1P0C628 307 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 CD80P33681 288 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 RFC3P40938 356 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 SSR4P51571 173 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 B3GALT5-AS1P59052 145 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 TMEM187Q14656 261 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 RAB35Q15286 201 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 RTL6Q6ICC9 239 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 Q6ZRG5 221 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 FGFBP3Q8TAT2 258 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 CMSS1Q9BQ75 279 aaKnown RBP12.89□□□□□ -0.35
ATG4B-220ENST00000482507 DDA1Q9BW61 102 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 ESRP2Q9H6T0 727 aaKnown RBP12.89□□□□□ -0.35
ATG4B-220ENST00000482507 WFDC1Q9HC57 220 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 CRLF2Q9HC73 371 aa12.89□□□□□ -0.35
ATG4B-220ENST00000482507 NXT1Q9UKK6 140 aaKnown RBP12.89□□□□□ -0.35
ATG4B-220ENST00000482507 PCP4L1A6NKN8 68 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 ZNF850A8MQ14 1090 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 C9J4A7 227 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 ECI1P42126 302 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 RAC1P63000 192 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 TGIF1Q15583 401 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 DHRS11Q6UWP2 260 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 LYZL2Q7Z4W2 148 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 OR10AD1Q8NGE0 317 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 RXFP4Q8TDU9 374 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 CT55Q8WUE5 264 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 SPSB1Q96BD6 273 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 ZFP57Q9NU63 452 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 ZDHHC8Q9ULC8 765 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 HSF4Q9ULV5 492 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 GAPDHP04406 335 aaKnown RBP12.88□□□□□ -0.35
ATG4B-220ENST00000482507 B4GALT1P15291 398 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 FXYD4P59646 89 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 PDZK1IP1Q13113 114 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.88□□□□□ -0.35
ATG4B-220ENST00000482507 YRDCQ86U90 279 aaKnown RBP12.88□□□□□ -0.35
ATG4B-220ENST00000482507 OR1F12Q8NHA8 337 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 ALKBH3Q96Q83 286 aaPredicted RBP12.88□□□□□ -0.35
ATG4B-220ENST00000482507 PARP11Q9NR21 331 aa12.88□□□□□ -0.35
ATG4B-220ENST00000482507 KIAA1549Q9HCM3 1950 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 DIRAS3O95661 229 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 APOC1P02654 83 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 LCATP04180 440 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 CRYBA1P05813 215 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 ZNF728P0DKX0 622 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 ZNF32P17041 273 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 RPL35P42766 123 aaKnown RBP12.87□□□□□ -0.35
ATG4B-220ENST00000482507 RAB13P51153 203 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 DAZAP2Q15038 168 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-220ENST00000482507 PHLDA2Q53GA4 152 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 ASCL4Q6XD76 172 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 GPR137CQ8N3F9 429 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 TMEM156Q8N614 296 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 OR11L1Q8NGX0 322 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 SPTBN4Q9H254 2564 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 NAA60Q9H7X0 242 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 NECAP2Q9NVZ3 263 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 EDARQ9UNE0 448 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 OR6C6A6NF89 314 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 XRCC2O43543 280 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 IFNA21P01568 189 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 CYC1P08574 325 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 SPP1P10451 314 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 EIF5AP63241 154 aaKnown RBP12.87□□□□□ -0.35
ATG4B-220ENST00000482507 EIF5AL1Q6IS14 154 aaKnown RBP12.87□□□□□ -0.35
ATG4B-220ENST00000482507 RPS19BP1Q86WX3 136 aaKnown RBP12.87□□□□□ -0.35
ATG4B-220ENST00000482507 FBXL14Q8N1E6 418 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 LYPD6BQ8NI32 183 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 RTN4IP1Q8WWV3 396 aaPredicted RBP12.87□□□□□ -0.35
ATG4B-220ENST00000482507 INTS12Q96CB8 462 aaKnown RBP12.87□□□□□ -0.35
ATG4B-220ENST00000482507 ZPBPQ9BS86 351 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 TMEM38BQ9NVV0 291 aa12.87□□□□□ -0.35
ATG4B-220ENST00000482507 NCKAP5O14513 1909 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 ZNF716A6NP11 495 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 JTBO76095 146 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 HEXAP06865 529 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 DTYMKP23919 212 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 MLF1P58340 268 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 EXT1Q16394 746 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 KRTAP27-1Q3LI81 207 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 SHEQ5VZ18 495 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 TMEM42Q69YG0 159 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 SLC22A25Q6T423 547 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 GGNQ86UU5 652 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 BATF2Q8N1L9 274 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 CCDC54Q8NEL0 328 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 OR52M1Q8NGK5 317 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 M1APQ8TC57 530 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 KIRREL1Q96J84 757 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 COLCA2A8K830 154 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 CST2P09228 141 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 RFPL3SP0C7P2 107 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 SPINK2P20155 84 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 OTX2P32243 289 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 AKR1C3P42330 323 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 KCNJ3P48549 501 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 FHITP49789 147 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 RBP2P50120 134 aa12.86□□□□□ -0.35
ATG4B-220ENST00000482507 F2RL1P55085 397 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms