RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 FAM90A20PA6NIJ5 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A9PA6NNJ1 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A12PA8MX19 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A5PA8MXJ8 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 LY6LH3BQJ8 138 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 AP4M1O00189 453 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 LDLRAD4O15165 306 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 SELENOFO60613 162 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 DHRS3O75911 302 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 IGHA1P01876 353 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 SEMG1P04279 462 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A15PP0C7V4 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A13PP0C7W8 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A14PP0C7W9 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM90A24PP0C7X0 464 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 PRRX1P54821 245 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FOXE3Q13461 319 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 GPR50Q13585 617 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 C16orf89Q6UX73 402 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 ANGPTL5Q86XS5 388 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 OR52N4Q8NGI2 321 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 OR56B4Q8NH76 319 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 TOMM40LQ969M1 308 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 RPEQ96AT9 228 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 PYURFQ96I23 114 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 ATP6V1G3Q96LB4 118 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 CEP19Q96LK0 163 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 BTBD10Q9BSF8 475 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 PBOV1Q9GZY1 135 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 OR51V1Q9H2C8 321 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 IL1RAPQ9NPH3 570 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 CMC2Q9NRP2 79 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 ARMC1Q9NVT9 282 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 FAM206AQ9NX38 181 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 GLS2Q9UI32 602 aa11.69□□□□□ -0.54
HDAC6-224ENST00000481929 TRGV10A0A0A0MS01 117 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 TMEM269A0A1B0GVZ9 245 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 DLGAP1O14490 977 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 MGST3O14880 152 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 SOX14O95416 240 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 HAND1O96004 215 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 IGLV3-1P01715 115 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 FABP3P05413 133 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 ELANEP08246 267 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 P2RX3P56373 397 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 ESRRGP62508 458 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.54
HDAC6-224ENST00000481929 TMEM42Q69YG0 159 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 ZNF429Q86V71 674 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 OR11H1Q8NG94 326 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 TEAD3Q99594 435 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 ISYNA1Q9NPH2 558 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 TAS2R1Q9NYW7 299 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 KLHDC2Q9Y2U9 406 aa11.68□□□□□ -0.54
HDAC6-224ENST00000481929 F8VVB4 439 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 F8VWA3 439 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 SASH3O75995 380 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 GASTP01350 101 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 OR8U8P0C7N1 319 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 GP9P14770 177 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 ERP29P30040 261 aaKnown RBP11.67□□□□□ -0.54
HDAC6-224ENST00000481929 HNF4GQ14541 408 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 C8orf82Q6P1X6 216 aaPredicted RBP11.67□□□□□ -0.54
HDAC6-224ENST00000481929 LHFPL2Q6ZUX7 228 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 RNF148Q8N7C7 305 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 RNF152Q8N8N0 203 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 EMG1Q92979 244 aaKnown RBP11.67□□□□□ -0.54
HDAC6-224ENST00000481929 SLAMF9Q96A28 289 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 HRASLS5Q96KN8 279 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 TAS2R3Q9NYW6 316 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 MTCH1Q9NZJ7 389 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 LAMP5Q9UJQ1 280 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 HERC2O95714 4834 aa11.67□□□□□ -0.54
HDAC6-224ENST00000481929 TRIM64CA6NLI5 447 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 LINC01548A6NM66 108 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 PSPNO60542 156 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 INMTO95050 263 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 SPNP16150 400 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 GDNFP39905 211 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 POU3F4P49335 361 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 KPNB1Q14974 876 aaKnown RBP11.66□□□□□ -0.54
HDAC6-224ENST00000481929 ENTHD1Q8IYW4 607 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 OR4D6Q8NGJ1 314 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 SEBOXQ9HB31 216 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-224ENST00000481929 ABCD2Q9UBJ2 740 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 NUFIP1Q9UHK0 495 aaKnown RBP11.66□□□□□ -0.54
HDAC6-224ENST00000481929 SLC7A11Q9UPY5 501 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 AMMECR1Q9Y4X0 333 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-224ENST00000481929 KIAA2026Q5HYC2 2103 aa11.66□□□□□ -0.54
HDAC6-224ENST00000481929 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 FAM230AA0A1W2PPH8 454 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 FUOMA2VDF0 154 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 TNFRSF11BO00300 401 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 RRP9O43818 475 aaKnown RBP11.65□□□□□ -0.54
HDAC6-224ENST00000481929 SAP30O75446 220 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 KRT36O76013 467 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 COX4I1P13073 169 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 MYF6P23409 242 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 GPR12P47775 334 aa11.65□□□□□ -0.54
HDAC6-224ENST00000481929 OR3A1P47881 315 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms