RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 SPIN3Q5JUX0 258 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 SHISA2Q6UWI4 295 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 GDPD3Q7L5L3 318 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 SERPINA12Q8IW75 414 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 PNKDQ8N490 385 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 C11orf42Q8N5U0 333 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 PARP16Q8N5Y8 322 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 OR5D14Q8NGL3 314 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 SNX22Q96L94 193 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 HEXA-AS1Q9H8Q6 139 aa13.89□□□□□ -0.19
HSPG2-209ENST00000480900 WNK1Q9H4A3 2382 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 BTBD17A6NE02 478 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 CCL3L1P16619 93 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 ETV1P50549 477 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 RAG2P55895 527 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 TMPRSS11AQ6ZMR5 421 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 SAXO1Q8IYX7 474 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 OR4F5Q8NH21 305 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 SGMS2Q8NHU3 365 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 TSEN15Q8WW01 171 aaKnown RBP13.88□□□□□ -0.19
HSPG2-209ENST00000480900 TAF15Q92804 592 aaKnown RBP eCLIP13.88□□□□□ -0.19
HSPG2-209ENST00000480900 RFT1Q96AA3 541 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 SPACA5Q96QH8 159 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 RHOFQ9HBH0 211 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 C1RLQ9NZP8 487 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 IL36RNQ9UBH0 155 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 DIMT1Q9UNQ2 313 aaKnown RBP13.88□□□□□ -0.19
HSPG2-209ENST00000480900 DHDHQ9UQ10 334 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 EXOSC1Q9Y3B2 195 aaKnown RBP13.88□□□□□ -0.19
HSPG2-209ENST00000480900 HSPE1-MOB4S4R3N1 261 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 PKD1L1Q8TDX9 2849 aa13.88□□□□□ -0.19
HSPG2-209ENST00000480900 IGKV1-12A0A0C4DH73 117 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 C17orf98A8MV24 154 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 CASQ2O14958 399 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-209ENST00000480900 SULT1B1O43704 296 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 GPR137BO60478 399 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 KDM4BO94953 1096 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 IGKV1D-12P01611 117 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 RBP4P02753 201 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 PIPP12273 146 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-209ENST00000480900 PRKACAP17612 351 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 MYL12AP19105 171 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 MDKP21741 143 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-209ENST00000480900 OMGP23515 440 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 GTF2A1P52655 376 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-209ENST00000480900 DLX6P56179 175 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 EDDM3BP56851 147 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 ERVFRD-1P60508 538 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 MEF2CQ06413 473 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-209ENST00000480900 CDK5R1Q15078 307 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 OGFRL1Q5TC84 451 aaPredicted RBP13.87□□□□□ -0.19
HSPG2-209ENST00000480900 RPL22L1Q6P5R6 122 aaKnown RBP13.87□□□□□ -0.19
HSPG2-209ENST00000480900 CRIP3Q6Q6R5 217 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 GDPGP1Q6ZNW5 385 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 C17orf107Q6ZR85 190 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 BEND2Q8NDZ0 799 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 OR5R1Q8NH85 324 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 RPS4Y2Q8TD47 263 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 BEX1Q9HBH7 125 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 HMG20AQ9NP66 347 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 GLS2Q9UI32 602 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 VPREB3Q9UKI3 123 aa13.87□□□□□ -0.19
HSPG2-209ENST00000480900 HCKP08631 526 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 ZNF728P0DKX0 622 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 CAPGP40121 348 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 RELBQ01201 579 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 KISS1Q15726 138 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 TAF9Q16594 264 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 OR2G6Q5TZ20 316 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 XAF1Q6GPH4 301 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 ZNF529Q6P280 563 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 RNF144BQ7Z419 303 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 ZSCAN4Q8NAM6 433 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-209ENST00000480900 GPR148Q8TDV2 347 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 RGP1Q92546 391 aaPredicted RBP13.86□□□□□ -0.19
HSPG2-209ENST00000480900 SLITRK2Q9H156 845 aa13.86□□□□□ -0.19
HSPG2-209ENST00000480900 hADV38S2A0JD32 116 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 SH2D1BO14796 132 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 MGST3O14880 152 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 PSPNO60542 156 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 CD2P06729 351 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 GABRR1P24046 479 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 DUSP1P28562 367 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 ZP1P60852 638 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 MED21Q13503 144 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 EDDM3AQ14507 147 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 GRK1Q15835 563 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 C8orf59Q8N0T1 100 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-209ENST00000480900 OR52N4Q8NGI2 321 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 OR5D18Q8NGL1 313 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 OR52N1Q8NH53 320 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 PPP1R35Q8TAP8 253 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 CPNE2Q96FN4 548 aaPredicted RBP13.85□□□□□ -0.19
HSPG2-209ENST00000480900 TMEM80Q96HE8 168 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 AJUBAQ96IF1 538 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 EXOSC4Q9NPD3 245 aaKnown RBP13.85□□□□□ -0.19
HSPG2-209ENST00000480900 PCDHGB5Q9Y5G0 923 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 LINC00312Q9Y6C7 94 aa13.85□□□□□ -0.19
HSPG2-209ENST00000480900 GNAO1P09471 354 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms