RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 NPIPA8P0DM63 369 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 FUT3P21217 361 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 CHRNA7P36544 502 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 POLR2HP52434 150 aaKnown RBP11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 TMPRSS3P57727 454 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 ICAM4Q14773 271 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 KIR2DS5Q14953 304 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 TMEM241Q24JQ0 296 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 CHRFAM7AQ494W8 412 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 SPSB3Q6PJ21 355 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 TMEM182Q6ZP80 229 aaPredicted RBP11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 ZNF547Q8IVP9 402 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 FAM185AQ8N0U4 392 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 OR5H2Q8NGV7 314 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 TIMM29Q9BSF4 260 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 CABLES2Q9BTV7 478 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 HHLA2Q9UM44 414 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 B3GALT5Q9Y2C3 310 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 HIF3AQ9Y2N7 669 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 LSM5Q9Y4Y9 91 aaKnown RBP11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 FAM230AA0A1W2PPH8 454 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 TSPAN2O60636 221 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 HBE1P02100 147 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 RPL29P47914 159 aaKnown RBP11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 ROM1Q03395 351 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 CFHR1Q03591 330 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 PRDX4Q13162 271 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 MRPL41Q8IXM3 137 aaKnown RBP11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 CPEB3Q8NE35 698 aaKnown RBP11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 LIPHQ8WWY8 451 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 ARSGQ96EG1 525 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 CCDC74BQ96LY2 380 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 C20orf144Q9BQM9 153 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 WFDC1Q9HC57 220 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 PRR13Q9NZ81 148 aa11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 C14orf166Q9Y224 244 aaKnown RBP11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 CHTOPQ9Y3Y2 248 aaKnown RBP11.53□□□□□ -0.56
CNKSR3-204ENST00000479339 A8MXE2 369 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 ETV2O00321 342 aaPredicted RBP11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 TAS2R46P59540 309 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 BTG2P78543 158 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 HHEXQ03014 270 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 COL10A1Q03692 680 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 IL13RA2Q14627 380 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 FAM189A2Q15884 450 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 PCK2Q16822 640 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 COL5A1-AS1Q5SY13 56 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 FHL5Q5TD97 284 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 KCTD18Q6PI47 426 aaPredicted RBP11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 SSX7Q7RTT5 188 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 CATSPERDQ86XM0 798 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 SLC24A4Q8NFF2 622 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 OR4D6Q8NGJ1 314 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 OR10G6Q8NH81 332 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 ZCCHC10Q8TBK6 192 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 TSSK2Q96PF2 358 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 BBC3Q96PG8 261 aaPredicted RBP11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 HIST1H2AAQ96QV6 131 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 DIRC2Q96SL1 478 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 PYGO2Q9BRQ0 406 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 SH3BGRL3Q9H299 93 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 P4HTMQ9NXG6 502 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 FKBP11Q9NYL4 201 aa11.52□□□□□ -0.56
CNKSR3-204ENST00000479339 IGKV1-8A0A0C4DH67 115 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF860A6NHJ4 632 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 TCF21O43680 179 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 GNB3P16520 340 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 HSD11B1P28845 292 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 QRFPP83859 136 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 FOXF1Q12946 379 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF266Q14584 549 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 MEP1BQ16820 701 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 ACOT6Q3I5F7 207 aaPredicted RBP11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 LEMD1Q68G75 181 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 SLC18B1Q6NT16 456 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 DPPA3Q6W0C5 159 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF705AQ6ZN79 300 aaPredicted RBP11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 LSRQ86X29 649 aaPredicted RBP11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 LRRC75AQ8NAA5 344 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 TMEM170AQ8WVE7 144 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 COL26A1Q96A83 441 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 MIEN1Q9BRT3 115 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 SRA1Q9HD15 236 aaKnown RBP11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 FBXO34Q9NWN3 711 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 SLC22A13Q9Y226 551 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 POLR3KQ9Y2Y1 108 aaPredicted RBP11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 LIPGQ9Y5X9 500 aa11.52□□□□□ -0.57
CNKSR3-204ENST00000479339 KIF26BQ2KJY2 2108 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 ITPR1Q14643 2758 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 LILRA5A6NI73 299 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 DUX1O43812 170 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 ISG15P05161 165 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 CEBPGP53567 150 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 UNC119Q13432 240 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 PMS2P11Q13670 270 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 KCNMB1Q16558 191 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 ALG10Q5BKT4 473 aa11.51□□□□□ -0.57
CNKSR3-204ENST00000479339 SP5Q6BEB4 398 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms