RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 OR13C3Q8NGS6 347 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 EMG1Q92979 244 aaKnown RBP19.08■□□□□ 0.64
C9orf3-215ENST00000478473 PKD1L1Q8TDX9 2849 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 DSCAML1Q8TD84 2053 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 KDM4BO94953 1096 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 HAND1O96004 215 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 CCL3L1P16619 93 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 DCKP27707 260 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 ERVFRD-1P60508 538 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 OLFML2AQ68BL7 652 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 ZNF529Q6P280 563 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 ASCC1Q8N9N2 400 aaKnown RBP19.07■□□□□ 0.64
C9orf3-215ENST00000478473 WFDC12Q8WWY7 111 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 ZCCHC4Q9H5U6 513 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 C16orf95Q9H693 158 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 HMG20AQ9NP66 347 aa19.07■□□□□ 0.64
C9orf3-215ENST00000478473 RBFOX1Q9NWB1 397 aaKnown RBP19.07■□□□□ 0.64
C9orf3-215ENST00000478473 IGKV1-12A0A0C4DH73 117 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 A0A1W2PRD5 423 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 A0A1W2PRF3 423 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 A0A1W2PRM7 423 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 FAM90A8PA6NJQ4 464 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 TSPAN9O75954 239 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 PAHP00439 452 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 IGKV1D-12P01611 117 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 ZNF728P0DKX0 622 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 BCL3P20749 454 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 GBX2P52951 348 aaPredicted RBP19.06■□□□□ 0.64
C9orf3-215ENST00000478473 CCDC58Q4VC31 144 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 TCF23Q7RTU1 214 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 SERPINA12Q8IW75 414 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 OR5AK2Q8NH90 309 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 NEK6Q9HC98 313 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 IL36RNQ9UBH0 155 aa19.06■□□□□ 0.64
C9orf3-215ENST00000478473 BTBD17A6NE02 478 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 SPRY1O43609 319 aaPredicted RBP19.05■□□□□ 0.64
C9orf3-215ENST00000478473 ANGPTL7O43827 346 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 LMO1P25800 156 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 ERP29P30040 261 aaKnown RBP19.05■□□□□ 0.64
C9orf3-215ENST00000478473 POU3F4P49335 361 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 ADARB1P78563 741 aaKnown RBP19.05■□□□□ 0.64
C9orf3-215ENST00000478473 SMN1Q16637 294 aaKnown RBP19.05■□□□□ 0.64
C9orf3-215ENST00000478473 TTC23Q5W5X9 447 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 GDPD3Q7L5L3 318 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 OR52N4Q8NGI2 321 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 OR5D14Q8NGL3 314 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 OR13C9Q8NGT0 318 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 LINC01006Q8NI28 216 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 PDCD1LG2Q9BQ51 273 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 COMMD4Q9H0A8 199 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 TRRAPQ9Y4A5 3859 aa19.05■□□□□ 0.64
C9orf3-215ENST00000478473 IRGMA1A4Y4 181 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 PSPNO60542 156 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 CLPXO76031 633 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 TGFBR2P37173 567 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 ZP1P60852 638 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 RNF144BQ7Z419 303 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 OR11H6Q8NGC7 330 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 C17orf50Q8WW18 174 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 LINC00312Q9Y6C7 94 aa19.04■□□□□ 0.64
C9orf3-215ENST00000478473 ODF3BA8MYP8 253 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 MGST3O14880 152 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 SULT1B1O43704 296 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 PEX2P28328 305 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 PROK1P58294 105 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 IL18R1Q13478 541 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 RPL22L1Q6P5R6 122 aaKnown RBP19.03■□□□□ 0.64
C9orf3-215ENST00000478473 Q6ZSV7 163 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 CITED1Q99966 193 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 GLS2Q9UI32 602 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 DIMT1Q9UNQ2 313 aaKnown RBP19.03■□□□□ 0.64
C9orf3-215ENST00000478473 HSPE1-MOB4S4R3N1 261 aa19.03■□□□□ 0.64
C9orf3-215ENST00000478473 hADV38S2A0JD32 116 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 VGLL3A8MV65 326 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 PIPP12273 146 aaPredicted RBP19.02■□□□□ 0.64
C9orf3-215ENST00000478473 PRKACAP17612 351 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 OR3A1P47881 315 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 ETV1P50549 477 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 KISS1Q15726 138 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 SETD9Q8NE22 299 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 PPP1R35Q8TAP8 253 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 RGP1Q92546 391 aaPredicted RBP19.02■□□□□ 0.64
C9orf3-215ENST00000478473 SSX3Q99909 188 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 DHDHQ9UQ10 334 aa19.02■□□□□ 0.64
C9orf3-215ENST00000478473 CASQ2O14958 399 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-215ENST00000478473 OGG1O15527 345 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 INMTO95050 263 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 CLIC3O95833 236 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 IGHV1-8P0DP01 117 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 GTF2A1P52655 376 aaPredicted RBP19.01■□□□□ 0.63
C9orf3-215ENST00000478473 EDDM3BP56851 147 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 CDK5R1Q15078 307 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 GRK1Q15835 563 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 LRRC75BQ2VPJ9 315 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 ZNF626Q68DY1 528 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 XAF1Q6GPH4 301 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 ELP2Q6IA86 826 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 ASPHD2Q6ICH7 369 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 Q8NFD4 153 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 PXT1Q8NFP0 134 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms