RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 MGLLQ99685 303 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 DNTTIP1Q9H147 329 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 TMEM138Q9NPI0 162 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 ACOT13Q9NPJ3 140 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 CKLFQ9UBR5 152 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 GSTK1Q9Y2Q3 226 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 ZFHX3Q15911 3703 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 SVEP1Q4LDE5 3571 aa8.5□□□□□ -1.05
HDAC6-222ENST00000478095 KIR2DS1A0A191URI9 304 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 A6NJY4 79 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 KDM4BO94953 1096 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 HAND1O96004 215 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 MAPK3P27361 379 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-222ENST00000478095 ZNF93P35789 620 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-222ENST00000478095 TGFBR2P37173 567 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 FGF12P61328 243 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 COL10A1Q03692 680 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 EMX1Q04741 257 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-222ENST00000478095 PAX8Q06710 450 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 TPBGQ13641 420 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 ARMCX4Q5H9R4 360 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 C1QL2Q7Z5L3 287 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 PHC2Q8IXK0 858 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 Q8IYB0 196 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 SPARTQ8N0X7 666 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 FAM58AQ8N1B3 248 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 JAGN1Q8N5M9 183 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 MS4A15Q8N5U1 240 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 OR10K1Q8NGX5 313 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 CPNE2Q96FN4 548 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-222ENST00000478095 PCGF1Q9BSM1 259 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 DCTN5Q9BTE1 182 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 HMG20AQ9NP66 347 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 ISYNA1Q9NPH2 558 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 ONECUT1Q9UBC0 465 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 RPUSD1Q9UJJ7 312 aaKnown RBP8.49□□□□□ -1.05
HDAC6-222ENST00000478095 MALRD1Q5VYJ5 2156 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 NAV3Q8IVL0 2385 aa8.49□□□□□ -1.05
HDAC6-222ENST00000478095 SETD2Q9BYW2 2564 aaPredicted RBP8.49□□□□□ -1.05
HDAC6-222ENST00000478095 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.48□□□□□ -1.051e-12■■■□□ 17.7
HDAC6-222ENST00000478095 A0A1W2PQ09 198 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 MEX3AA1L020 520 aaKnown RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 SIRPB1O00241 398 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 GPX5O75715 221 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 RGS9O75916 674 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 CDRT1O95170 752 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 ALDOBP05062 364 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 PPIAL4GP0DN37 164 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 CPEP16870 476 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 PSMB9P28065 219 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 GP2P55259 537 aaKnown RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 CAV3P56539 151 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 ARF6P62330 175 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 PDCD1Q15116 288 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 SSX1Q16384 188 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 KLF17Q5JT82 389 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 FIP1L1Q6UN15 594 aaKnown RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 CEACAM19Q7Z692 300 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 SAXO1Q8IYX7 474 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 FAM185AQ8N0U4 392 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 SVOPQ8N4V2 548 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 ZNF561Q8N587 486 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 PNLDC1Q8NA58 520 aaKnown RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 OR4M1Q8NGD0 313 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 NANPQ8TBE9 248 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 C22orf15Q8WYQ4 148 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 NR1H4Q96RI1 486 aaPredicted RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 YTHDF1Q9BYJ9 559 aaKnown RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 CHST6Q9GZX3 395 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 PPIL3Q9H2H8 161 aaKnown RBP8.48□□□□□ -1.05
HDAC6-222ENST00000478095 TCF7L1Q9HCS4 588 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 C19orf12Q9NSK7 152 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 ING4Q9UNL4 249 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 FOXJ3Q9UPW0 622 aa8.48□□□□□ -1.05
HDAC6-222ENST00000478095 TRAV40A0A0B4J280 105 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 TMEM82A0PJX8 343 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 PSPNO60542 156 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 MRPS14O60783 128 aaKnown RBP8.47□□□□□ -1.05
HDAC6-222ENST00000478095 SC5DO75845 299 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 ECDO95905 644 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-222ENST00000478095 FSHBP01225 129 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 TK1P04183 234 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 CHRM2P08172 466 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 IGHV4-38-2P0DP08 117 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 EPHA1P21709 976 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 GABRR1P24046 479 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 PTGFRP43088 359 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 DLX1P56177 255 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 SRSF2Q01130 221 aaKnown RBP8.47□□□□□ -1.05
HDAC6-222ENST00000478095 FABP5Q01469 135 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 PRB3Q04118 309 aaPredicted RBP8.47□□□□□ -1.05
HDAC6-222ENST00000478095 SCN1BQ07699 218 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 GPR50Q13585 617 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 EDDM3AQ14507 147 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 ZNF146Q15072 292 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 RSU1Q15404 277 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 PIGYQ3MUY2 71 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 HSD17B12Q53GQ0 312 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 SPIN3Q5JUX0 258 aa8.47□□□□□ -1.05
HDAC6-222ENST00000478095 METTL11BQ5VVY1 283 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms