RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 GALEQ14376 348 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 EDDM3AQ14507 147 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 TNFAIP8L3Q5GJ75 292 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 UTF1Q5T230 341 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 LGALS9CQ6DKI2 356 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 HEPN1Q6WQI6 88 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 VTCN1Q7Z7D3 282 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 CATSPERDQ86XM0 798 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 BATF2Q8N1L9 274 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 PROKR2Q8NFJ6 384 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 OR51L1Q8NGJ5 315 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 RNF133Q8WVZ7 376 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 ARPC1AQ92747 370 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 ZBTB9Q96C00 473 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 SNX22Q96L94 193 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 C16orf45Q96MC5 204 aaPredicted RBP5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 EBF4Q9BQW3 602 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 ZNF286AQ9HBT8 521 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 TPSG1Q9NRR2 321 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 FAM53CQ9NYF3 392 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 DNAJC27Q9NZQ0 273 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 DNAJB9Q9UBS3 223 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 VSIG4Q9Y279 399 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 MUC4Q99102 2169 aa5.62□□□□□ -1.51
SPTLC1-205ENST00000477888 A0A087X0M5 115 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 A0A1B0GX30 115 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 A0A1W2PPI3 338 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 A0A1W2PRQ8 180 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 J3QT63 122 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 TOR1AO14656 332 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 ST8SIA5O15466 376 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 SERPINA1P01009 418 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 IGF1P05019 195 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 OR8U9P0C7N5 309 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 RHCEP18577 417 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 CDK2P24941 298 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 MPZP25189 248 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 HSD11B1P28845 292 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 SLC6A6P31641 620 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 OPRL1P41146 370 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 HAAOP46952 286 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 PRRX1P54821 245 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 SLURP1P55000 103 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 DGCR6Q14129 220 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 DYNC1H1Q14204 4646 aaKnown RBP5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 EBI3Q14213 229 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 HES1Q14469 280 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 LRRC23Q53EV4 343 aaPredicted RBP5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 PRAMEF5Q5TYX0 476 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 ERICH5Q6P6B1 374 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 CEMP1Q6PRD7 247 aaPredicted RBP5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 HAPLN4Q86UW8 402 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 TGIF2LXQ8IUE1 241 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 Q8N9W7 124 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 OR52N4Q8NGI2 321 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 OR2T4Q8NH00 348 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 ITFG2Q969R8 447 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 RPEQ96AT9 228 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 PGAM5Q96HS1 289 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 HRASLS5Q96KN8 279 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 KCTD7Q96MP8 289 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 OR5B12Q96R08 314 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 OR4C12Q96R67 309 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 AMELYQ99218 206 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 THAP7Q9BT49 309 aaPredicted RBP5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 CCDC28BQ9BUN5 200 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 IFT27Q9BW83 186 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 TMEM120AQ9BXJ8 343 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 OR51J1Q9H342 316 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 OR52D1Q9H346 318 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 TUBA4BQ9H853 241 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 PCDHB16Q9NRJ7 776 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 PLSCR3Q9NRY6 295 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 LIN7CQ9NUP9 197 aaKnown RBP5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 CHCHD3Q9NX63 227 aaKnown RBP5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 ZNF580Q9UK33 172 aa5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 UBE2J1Q9Y385 318 aaPredicted RBP5.61□□□□□ -1.51
SPTLC1-205ENST00000477888 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 NUPR2A6NF83 97 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 F8VVB4 439 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 F8VWA3 439 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 ANGPT2O15123 496 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 RRP9O43818 475 aaKnown RBP5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 IGKV1D-33P01593 117 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 IGKV1-33P01594 117 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 VDAC1P21796 283 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 PPIFP30405 207 aaKnown RBP5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 FMO3P31513 532 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 DIAPH2-AS1Q14236 149 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 RBM39Q14498 530 aaKnown RBP5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 FDX2Q6P4F2 183 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 TMEM65Q6PI78 240 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 MOB3CQ70IA8 216 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 ZNF573Q86YE8 665 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 PGAM4Q8N0Y7 254 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 Q8N6K4 173 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 FAM86B1Q8N7N1 296 aa5.6□□□□□ -1.51
SPTLC1-205ENST00000477888 OR8J3Q8NGG0 315 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms