RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 GRK1Q15835 563 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 ASPHD2Q6ICH7 369 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 C11orf88Q6PI97 169 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 C4orf36Q96KX1 117 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 OPALINQ96PE5 141 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 MBOAT4Q96T53 435 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 EXOGQ9Y2C4 368 aaKnown RBP12.77□□□□□ -0.37
CLDN11-204ENST00000477531 TBL2Q9Y4P3 447 aaKnown RBP12.77□□□□□ -0.37
CLDN11-204ENST00000477531 MEGF8Q7Z7M0 2845 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 FADS2O95864 444 aaKnown RBP12.76□□□□□ -0.37
CLDN11-204ENST00000477531 BCL3P20749 454 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 KIR2DS4P43632 304 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 NPBWR2P48146 333 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 DLX6P56179 175 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 NANOS3P60323 173 aaKnown RBP12.76□□□□□ -0.37
CLDN11-204ENST00000477531 ZNF91Q05481 1191 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 PDZK1IP1Q13113 114 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 DYNC1I2Q13409 638 aaKnown RBP12.76□□□□□ -0.37
CLDN11-204ENST00000477531 GALEQ14376 348 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 SPIN3Q5JUX0 258 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 ZBTB49Q6ZSB9 765 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 Q6ZTK2 550 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 OR2T6Q8NHC8 308 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 LGALS12Q96DT0 336 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 MALSU1Q96EH3 234 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 PELI1Q96FA3 418 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 AJUBAQ96IF1 538 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 ALG8Q9BVK2 526 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 NPFFR1Q9GZQ6 430 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 RANBP3Q9H6Z4 567 aaPredicted RBP12.76□□□□□ -0.37
CLDN11-204ENST00000477531 RBFOX1Q9NWB1 397 aaKnown RBP12.76□□□□□ -0.37
CLDN11-204ENST00000477531 CMYA5Q8N3K9 4069 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 WNK1Q9H4A3 2382 aa12.76□□□□□ -0.37
CLDN11-204ENST00000477531 IGKV1-9A0A0C4DH69 117 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 TMEM82A0PJX8 343 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 MEX3AA1L020 520 aaKnown RBP12.75□□□□□ -0.37
CLDN11-204ENST00000477531 FUOMA2VDF0 154 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 H3BUI4 141 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 SH2D1BO14796 132 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 MGST3O14880 152 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 IGHV1-8P0DP01 117 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 DBTP11182 482 aaKnown RBP12.75□□□□□ -0.37
CLDN11-204ENST00000477531 PAX6P26367 422 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 DUSP1P28562 367 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 SNU13P55769 128 aaKnown RBP12.75□□□□□ -0.37
CLDN11-204ENST00000477531 DEFA6Q01524 100 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 MRPL28Q13084 256 aaKnown RBP12.75□□□□□ -0.37
CLDN11-204ENST00000477531 ZNF146Q15072 292 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 FAM189A2Q15884 450 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 C2orf68Q2NKX9 166 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 LHFPL4Q7Z7J7 247 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 TRAPPC6BQ86SZ2 158 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 LHFPL3Q86UP9 236 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 OR11H6Q8NGC7 330 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 RNF166Q96A37 237 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-204ENST00000477531 RFT1Q96AA3 541 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 NKX3-1Q99801 234 aaPredicted RBP12.75□□□□□ -0.37
CLDN11-204ENST00000477531 CHST6Q9GZX3 395 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 EXOSC4Q9NPD3 245 aaKnown RBP12.75□□□□□ -0.37
CLDN11-204ENST00000477531 INPP5EQ9NRR6 644 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 PITPNC1Q9UKF7 332 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 LINC00312Q9Y6C7 94 aa12.75□□□□□ -0.37
CLDN11-204ENST00000477531 LOC100130705A0A1B0GUX0 176 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 FAM90A8PA6NJQ4 464 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 OR4C45A6NMZ5 311 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 E9PQ18 207 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 KCNAB3O43448 404 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 IGHA1P01876 353 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 MT-ND2P03891 347 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 CCDC159P0C7I6 412 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 HERPUD1Q15011 391 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 PLA1AQ53H76 456 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 ZNF626Q68DY1 528 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 SYS1Q8N2H4 156 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 OR5D14Q8NGL3 314 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 OR13C9Q8NGT0 318 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 RHOXF1Q8NHV9 184 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 RPS4Y2Q8TD47 263 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 HAVCR2Q8TDQ0 301 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 CDCA4Q9BXL8 241 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 COMMD4Q9H0A8 199 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 ZCCHC4Q9H5U6 513 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 RHOFQ9HBH0 211 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 S100A14Q9HCY8 104 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 HMG20AQ9NP66 347 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 IL36RNQ9UBH0 155 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 AASSQ9UDR5 926 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 GSTK1Q9Y2Q3 226 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 RPL36Q9Y3U8 105 aaKnown RBP12.74□□□□□ -0.37
CLDN11-204ENST00000477531 SESN1Q9Y6P5 492 aa12.74□□□□□ -0.37
CLDN11-204ENST00000477531 ERICH4A6NGS2 130 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 TMEM212A6NML5 194 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 VGLL3A8MV65 326 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 ODF3BA8MYP8 253 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 SIRPB1O00241 398 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 HCKP08631 526 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 CALCBP10092 127 aa12.73□□□□□ -0.37
CLDN11-204ENST00000477531 ERP29P30040 261 aaKnown RBP12.73□□□□□ -0.37
CLDN11-204ENST00000477531 GBX2P52951 348 aaPredicted RBP12.73□□□□□ -0.37
CLDN11-204ENST00000477531 RAB40BQ12829 278 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms