RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 HOXA4Q00056 320 aaPredicted RBP10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 NEDD8Q15843 81 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 KLF17Q5JT82 389 aaPredicted RBP10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 ANGPTL5Q86XS5 388 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 BPIFB2Q8N4F0 458 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 Q8NFD4 153 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 PXT1Q8NFP0 134 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 OR5D13Q8NGL4 314 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 OR13C9Q8NGT0 318 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 TRMT10AQ8TBZ6 339 aaKnown RBP10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 TSEN15Q8WW01 171 aaKnown RBP10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 TMEM106AQ96A25 262 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 SEH1LQ96EE3 360 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 SIRPDQ9H106 197 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 CKLFQ9UBR5 152 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 GLS2Q9UI32 602 aa10.21□□□□□ -0.77
CLCNKA-205ENST00000477360 PNMA8CA0A1B0GUJ8 204 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 TOX4O94842 621 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 RBP4P02753 201 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 LMO1P25800 156 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 TGFBR2P37173 567 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 GABRA2P47869 451 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 IKZF1Q13422 519 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 BLMHQ13867 455 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 KISS1Q15726 138 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 GPR157Q5UAW9 335 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 ELP2Q6IA86 826 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 ASCL4Q6XD76 172 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 RBMS3Q6XE24 437 aaKnown RBP10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 FAM58AQ8N1B3 248 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 CD177Q8N6Q3 437 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 OR5T2Q8NGG2 359 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 OR13F1Q8NGS4 319 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 PPP1R35Q8TAP8 253 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 DERL3Q96Q80 235 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 METTL8Q9H825 291 aaKnown RBP10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 NOX4Q9NPH5 578 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 TMEM138Q9NPI0 162 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 SNTG1Q9NSN8 517 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 STAB1Q9NY15 2570 aa10.2□□□□□ -0.78
CLCNKA-205ENST00000477360 TRDV1A0A1B0GX56 115 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 hCG_1809904A0A1W2PP81 198 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 A0A1W2PPE2 198 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 A0A1W2PR64 198 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 A0A1W2PRV1 198 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 ZNF780AO75290 641 aaPredicted RBP10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 ZNF737O75373 536 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 RGS9O75916 674 aaPredicted RBP10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 TK1P04183 234 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 UCHL1P09936 223 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 IGFBP3P17936 291 aaPredicted RBP10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 FGF9P31371 208 aaPredicted RBP10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 MTNR1BP49286 362 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 RPS25P62851 125 aaKnown RBP10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 PPP3R1P63098 170 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 GUCA2AQ02747 115 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 MEF2CQ06413 473 aaPredicted RBP10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 ACSM3Q53FZ2 586 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 DMRTC1Q5HYR2 192 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 NCR3LG1Q68D85 454 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 ASPHD2Q6ICH7 369 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 TMEM91Q6ZNR0 172 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 GDPGP1Q6ZNW5 385 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 OR8H2Q8N162 312 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 CHST4Q8NCG5 386 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 ZNRF1Q8ND25 227 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 OR13C5Q8NGS8 318 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 SNX22Q96L94 193 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 OR14A2Q96R54 314 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 TBX15Q96SF7 602 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 MS4A7Q9GZW8 240 aaPredicted RBP10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 OCEL1Q9H607 264 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 HMG20AQ9NP66 347 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 PCDHB16Q9NRJ7 776 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 IL36GQ9NZH8 169 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 FOXJ3Q9UPW0 622 aa10.19□□□□□ -0.78
CLCNKA-205ENST00000477360 ARHGAP32A7KAX9 2087 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 A0A1B0GW55 424 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 H3BSH0 61 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 TRIM77I1YAP6 450 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 GABRPO00591 440 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 CSN2P05814 226 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 HCKP08631 526 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 DUX4L2P0CJ85 424 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 DUX4L3P0CJ86 424 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 DUX4L4P0CJ87 422 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 DUX4L5P0CJ88 424 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 DUX4L6P0CJ89 424 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 DUX4L7P0CJ90 424 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 NDUFB7P17568 137 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 PRTN3P24158 256 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 ERP29P30040 261 aaKnown RBP10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 RPL5P46777 297 aaKnown RBP10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 SOX2P48431 317 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 ZP1P60852 638 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 GMFBP60983 142 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 FABP5Q01469 135 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 PAX5Q02548 391 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 TIMM50Q3ZCQ8 353 aa10.18□□□□□ -0.78
CLCNKA-205ENST00000477360 NHLRC3Q5JS37 347 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms