RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 ZNF286AQ9HBT8 521 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 ACKR4Q9NPB9 350 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 TUBD1Q9UJT1 453 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 PCDHB10Q9UN67 800 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 FAM90A10PA6NDY2 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A18PA6NE21 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A16PA6NEW6 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A20PA6NIJ5 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A8PA6NJQ4 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A7PA6NKC0 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM166BA8MTA8 275 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A22PA8MWA6 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A12PA8MX19 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A5PA8MXJ8 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A23PA8MXZ1 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 PRSS44E7EML9 344 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 MSTNO14793 375 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 TPD52L2O43399 206 aaKnown RBP14.21□□□□□ -0.14
TMEM53-208ENST00000476724 SFTPBP07988 381 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A15PP0C7V4 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A13PP0C7W8 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A14PP0C7W9 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 FAM90A24PP0C7X0 464 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF728P0DKX0 622 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF708P17019 499 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 RRADP55042 308 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 CLDN18P56856 261 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 TMEM211Q6ICI0 200 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 EIF5AL1Q6IS14 154 aaKnown RBP14.21□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF585AQ6P3V2 769 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.21□□□□□ -0.14
TMEM53-208ENST00000476724 CPEB3Q8NE35 698 aaKnown RBP14.21□□□□□ -0.14
TMEM53-208ENST00000476724 Q8NFD4 153 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 LHFPL5Q8TAF8 219 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 GALNT14Q96FL9 552 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 TTTY12Q9BZ98 90 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 SLC5A7Q9GZV3 580 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF552Q9H707 407 aaPredicted RBP14.21□□□□□ -0.14
TMEM53-208ENST00000476724 SLC7A10Q9NS82 523 aa14.21□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF724A8MTY0 619 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 APOC3P02656 99 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 SP1P08047 785 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 FUT3P21217 361 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 OPRM1P35372 400 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 UCP3P55916 312 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 RBM11P57052 281 aaKnown RBP14.2□□□□□ -0.14
TMEM53-208ENST00000476724 ARF1P84077 181 aaKnown RBP14.2□□□□□ -0.14
TMEM53-208ENST00000476724 SMCO1Q147U7 214 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 IAH1Q2TAA2 248 aaPredicted RBP14.2□□□□□ -0.14
TMEM53-208ENST00000476724 PIGYQ3MUY2 71 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 OR1S2Q8NGQ3 325 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 SLC6A15Q9H2J7 730 aa14.2□□□□□ -0.14
TMEM53-208ENST00000476724 PTPRZ1P23471 2315 aaPredicted RBP14.2□□□□□ -0.14
TMEM53-208ENST00000476724 MSGN1A6NI15 193 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF587BE7ETH6 402 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 MAGEA5P43359 124 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 PIGPP57054 158 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 S100A10P60903 97 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 CLN3Q13286 438 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 ABCA11PQ4W5N1 156 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 BPIFCQ8NFQ6 507 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 SYT3Q9BQG1 590 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 REPIN1Q9BWE0 567 aaKnown RBP14.19□□□□□ -0.14
TMEM53-208ENST00000476724 SUCNR1Q9BXA5 334 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 NME2P1O60361 137 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 NME2P22392 152 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 MEOX1P50221 254 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 CCL11P51671 97 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 PRSS12P56730 875 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 SOX8P57073 446 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 SRYQ05066 204 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 RTP5Q14D33 572 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 SAXO1Q8IYX7 474 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 LRTM2Q8N967 370 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 ARL11Q969Q4 196 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 NAA60Q9H7X0 242 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 C12orf4Q9NQ89 552 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 ASF1BQ9NVP2 202 aa14.19□□□□□ -0.14
TMEM53-208ENST00000476724 IGHV3-9P01782 118 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 PXDC1Q5TGL8 231 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 GGNBP1Q5YKI7 109 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 SLC22A25Q6T423 547 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 TMEM200AQ86VY9 491 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 TUSC5Q8IXB3 177 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 TMEM251Q8N6I4 163 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF611Q8N823 705 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 BHLHE23Q8NDY6 225 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 SAT2Q96F10 170 aaPredicted RBP14.18□□□□□ -0.14
TMEM53-208ENST00000476724 LIME1Q9H400 295 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 ZFP57Q9NU63 452 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 ZNF407Q9C0G0 2248 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 LAMA5O15230 3695 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 CDK2AP1O14519 115 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 TSPAN4O14817 238 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 FAM157CP0CG43 387 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 HKR1P10072 659 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 GLP1RP43220 463 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 FDCSPQ8NFU4 85 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 TMED6Q8WW62 240 aa14.18□□□□□ -0.14
TMEM53-208ENST00000476724 RTN4IP1Q8WWV3 396 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms