RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 NAAAQ02083 359 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 RAB11BQ15907 218 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 ZNF718Q3SXZ3 478 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 SPANXN2Q5MJ10 180 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 PNLDC1Q8NA58 520 aaKnown RBP5.37□□□□□ -1.55
CLDN4-205ENST00000476494 SPERTQ8NA61 448 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 ZSCAN4Q8NAM6 433 aaPredicted RBP5.37□□□□□ -1.55
CLDN4-205ENST00000476494 NUP37Q8NFH4 326 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 OR1J1Q8NGS3 322 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 ZNF671Q8TAW3 534 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 C15orf40Q8WUR7 153 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 PTX4Q96A99 478 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 HAVCR1Q96D42 359 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 ITPKCQ96DU7 683 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 ADAT3Q96EY9 351 aaPredicted RBP5.37□□□□□ -1.55
CLDN4-205ENST00000476494 MS4A3Q96HJ5 214 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 WDFY2Q96P53 400 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 HIST1H2AAQ96QV6 131 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 WDR12Q9GZL7 423 aaKnown RBP5.37□□□□□ -1.55
CLDN4-205ENST00000476494 C16orf95Q9H693 158 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 PLGRKTQ9HBL7 147 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 SMURF1Q9HCE7 757 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 PCDHB16Q9NRJ7 776 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 MRPL15Q9P015 296 aaKnown RBP5.37□□□□□ -1.55
CLDN4-205ENST00000476494 DAPK2Q9UIK4 370 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 SPATA2Q9UM82 520 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 CMAHPQ9Y471 501 aa5.37□□□□□ -1.55
CLDN4-205ENST00000476494 A0A0A6YYH2 397 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 A6NJ64 397 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CD300LBA8K4G0 201 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CTDSP2O14595 271 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 RGS5O15539 181 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 SCGNO76038 276 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 BPNT1O95861 308 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 HCKP08631 526 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CELA3BP08861 270 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 FAHP16930 419 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 KITLGP21583 273 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 HTR2CP28335 458 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CD40LGP29965 261 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 TNFSF8P32971 234 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 ZNF93P35789 620 aaPredicted RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 ALDH3B1P43353 468 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 EVX1P49640 407 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 RBP2P50120 134 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 ATP1B3P54709 279 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CAV3P56539 151 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 OR10A3P58181 314 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 MZT1Q08AG7 82 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 ZNF154Q13106 437 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 GPR176Q14439 515 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 ZNF846Q147U1 533 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 DEFB112Q30KQ8 113 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CEACAM21Q3KPI0 293 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 DMRTC1Q5HYR2 192 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 MBNL2Q5VZF2 373 aaKnown RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 VHLLQ6RSH7 139 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 BAIAP2L2Q6UXY1 529 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 Q6YL49 198 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 Q6ZSV7 163 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 LHFPL2Q6ZUX7 228 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 RFPL4BQ6ZWI9 263 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 NR2C2APQ86WQ0 139 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 LRRC28Q86X40 367 aaPredicted RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 LYPD6Q86Y78 171 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 ZNF101Q8IZC7 436 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 OR5AS1Q8N127 324 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 PAQR4Q8N4S7 273 aaPredicted RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 JAGN1Q8N5M9 183 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 WFDC9Q8NEX5 89 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 OR5A2Q8NGI9 324 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 OR13C9Q8NGT0 318 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 OR2AE1Q8NHA4 323 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 RAB40AQ8WXH6 277 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CFHR4Q92496 578 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 RAB39BQ96DA2 213 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CMBLQ96DG6 245 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 S100A16Q96FQ6 103 aaKnown RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 MARS2Q96GW9 593 aaKnown RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 SLC30A2Q9BRI3 323 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 MS4A7Q9GZW8 240 aaPredicted RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 PALMDQ9NP74 551 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 PTTG3PQ9NZH4 202 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 COMMD3Q9UBI1 195 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 FBLN5Q9UBX5 448 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 CGGBP1Q9UFW8 167 aaPredicted RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 AUP1Q9Y679 476 aa5.36□□□□□ -1.55
CLDN4-205ENST00000476494 PLECQ15149 4684 aaKnown RBP5.36□□□□□ -1.55
CLDN4-205ENST00000476494 IGKV1-9A0A0C4DH69 117 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.35□□□□□ -1.55
CLDN4-205ENST00000476494 METTL21EPA6NDL7 271 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 FABP12A6NFH5 140 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 OR5B21A6NL26 309 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 IQCF6A8MYZ5 107 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 H3BSH0 61 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 H3BUI4 141 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 ZNF780AO75290 641 aaPredicted RBP5.35□□□□□ -1.55
CLDN4-205ENST00000476494 ZNF250P15622 560 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 ARSBP15848 533 aa5.35□□□□□ -1.55
CLDN4-205ENST00000476494 RAB6AP20340 208 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms