RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 IRGMA1A4Y4 181 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 ALX3O95076 343 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 CYB5AP00167 134 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 LALBAP00709 142 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 OCM2P0CE71 109 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 OCMP0CE72 109 aaPredicted RBP17.28■□□□□ 0.36
LIME1-204ENST00000476183 SAA4P35542 130 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 SNU13P55769 128 aaKnown RBP17.28■□□□□ 0.36
LIME1-204ENST00000476183 DLX6P56179 175 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 ASPHD2Q6ICH7 369 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 RPL22L1Q6P5R6 122 aaKnown RBP17.28■□□□□ 0.36
LIME1-204ENST00000476183 SERPINA12Q8IW75 414 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 OR52N4Q8NGI2 321 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 OR5D13Q8NGL4 314 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 TSEN15Q8WW01 171 aaKnown RBP17.28■□□□□ 0.36
LIME1-204ENST00000476183 SNX22Q96L94 193 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 SEBOXQ9HB31 216 aaPredicted RBP17.28■□□□□ 0.36
LIME1-204ENST00000476183 EXOSC1Q9Y3B2 195 aaKnown RBP17.28■□□□□ 0.36
LIME1-204ENST00000476183 FAM96BQ9Y3D0 163 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 HSPE1-MOB4S4R3N1 261 aa17.28■□□□□ 0.36
LIME1-204ENST00000476183 MEX3AA1L020 520 aaKnown RBP17.27■□□□□ 0.36
LIME1-204ENST00000476183 MEIOCA2RUB1 952 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 SULT1B1O43704 296 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 KDM4BO94953 1096 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 RPSAP08865 295 aaKnown RBP17.27■□□□□ 0.36
LIME1-204ENST00000476183 PRKACAP17612 351 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 OMGP23515 440 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 SOX2P48431 317 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 ZNF146Q15072 292 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 CCDC58Q4VC31 144 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 TMPRSS11AQ6ZMR5 421 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 OR8H2Q8N162 312 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 OR5D14Q8NGL3 314 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 FBLIM1Q8WUP2 373 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 C17orf50Q8WW18 174 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 TMEM80Q96HE8 168 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 HMG20AQ9NP66 347 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 ZNRD1Q9P1U0 126 aa17.27■□□□□ 0.36
LIME1-204ENST00000476183 OGG1O15527 345 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 PSPNO60542 156 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 FBP1P09467 338 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 MYL12AP19105 171 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 EDDM3BP56851 147 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 ZP1P60852 638 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 RELBQ01201 579 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 ZNF529Q6P280 563 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 TCF23Q7RTU1 214 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 C8orf59Q8N0T1 100 aaPredicted RBP17.26■□□□□ 0.35
LIME1-204ENST00000476183 ZNF485Q8NCK3 441 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 OR51A2Q8NGJ7 313 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 TBC1D15Q8TC07 691 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 AJUBAQ96IF1 538 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 CHST6Q9GZX3 395 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 DCLRE1BQ9H816 532 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 BABAM2Q9NXR7 383 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 SF3B6Q9Y3B4 125 aaKnown RBP17.26■□□□□ 0.35
LIME1-204ENST00000476183 TRRAPQ9Y4A5 3859 aa17.26■□□□□ 0.35
LIME1-204ENST00000476183 A0A1W2PPH5 198 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 XPNPEP2O43895 674 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 HCKP08631 526 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 MDKP21741 143 aaPredicted RBP17.25■□□□□ 0.35
LIME1-204ENST00000476183 ACSM1Q08AH1 577 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 ST3GAL4Q11206 333 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 EDDM3AQ14507 147 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 KISS1Q15726 138 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 TAF9Q16594 264 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 GDPD3Q7L5L3 318 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 TPRX1Q8N7U7 411 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 OR4S1Q8NGB4 309 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 GPR148Q8TDV2 347 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 ZNF747Q9BV97 191 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 NEK6Q9HC98 313 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 TAS2R4Q9NYW5 299 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 C1RLQ9NZP8 487 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 GSTK1Q9Y2Q3 226 aa17.25■□□□□ 0.35
LIME1-204ENST00000476183 C17orf98A8MV24 154 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 GABRR1P24046 479 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 GRK1Q15835 563 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 SPIN3Q5JUX0 258 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 ZNF782Q6ZMW2 699 aaPredicted RBP17.24■□□□□ 0.35
LIME1-204ENST00000476183 SAXO1Q8IYX7 474 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 OR13C5Q8NGS8 318 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 OR52N1Q8NH53 320 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 TFAP2CQ92754 450 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 SMIM19Q96E16 107 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 PSORS1C1Q9UIG5 152 aa17.24■□□□□ 0.35
LIME1-204ENST00000476183 SIRPB1O00241 398 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 GPR137BO60478 399 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 OR2H2O95918 312 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 COX7A1P24310 79 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 OR3A1P47881 315 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 BMXP51813 675 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 SLC34A1Q06495 639 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 DOC2BQ14184 412 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 DMKNQ6E0U4 476 aaPredicted RBP17.23■□□□□ 0.35
LIME1-204ENST00000476183 ZFP41Q8N8Y5 198 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 ZSCAN4Q8NAM6 433 aaPredicted RBP17.23■□□□□ 0.35
LIME1-204ENST00000476183 NRG4Q8WWG1 115 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 DYRK2Q92630 601 aa17.23■□□□□ 0.35
LIME1-204ENST00000476183 NKX3-1Q99801 234 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms