RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 EDDM3BP56851 147 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 MEF2CQ06413 473 aaPredicted RBP15.02■□□□□ -0
COL7A1-209ENST00000474432 PDZK1IP1Q13113 114 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 ZNF146Q15072 292 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 ZNF626Q68DY1 528 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 LHFPL3Q86UP9 236 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 FAM58AQ8N1B3 248 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 TPRX1Q8N7U7 411 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 OR4S1Q8NGB4 309 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 OR11H6Q8NGC7 330 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 ISG20L2Q9H9L3 353 aaKnown RBP15.02■□□□□ -0
COL7A1-209ENST00000474432 TCF7L1Q9HCS4 588 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 GMPPBQ9Y5P6 360 aa15.02■□□□□ -0
COL7A1-209ENST00000474432 KIAA2026Q5HYC2 2103 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 hCG_1809904A0A1W2PP81 198 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 A0A1W2PPE2 198 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 A0A1W2PR64 198 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 A0A1W2PRV1 198 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 VGLL3A8MV65 326 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 E9PI62 339 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 M0QZ24 198 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 TSPAN15O95858 294 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 MT-ND2P03891 347 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 PRKACBP22694 351 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 POU3F4P49335 361 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 DEFA6Q01524 100 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 ALKBH1Q13686 389 aaKnown RBP15.01□□□□□ -0.01
COL7A1-209ENST00000474432 GALEQ14376 348 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 CCBE1Q6UXH8 406 aaPredicted RBP15.01□□□□□ -0.01
COL7A1-209ENST00000474432 CCDC121Q6ZUS5 278 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 GDPD3Q7L5L3 318 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 Q8IYB0 196 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 SPACA5Q96QH8 159 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 CHST6Q9GZX3 395 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 MMP27Q9H306 513 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 S100A14Q9HCY8 104 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 HMG20AQ9NP66 347 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 AMBNQ9NP70 447 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 HHLA2Q9UM44 414 aa15.01□□□□□ -0.01
COL7A1-209ENST00000474432 GABRA5P31644 462 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 OR3A1P47881 315 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 RAB13P51153 203 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 EDDM3AQ14507 147 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 HIST2H2BDQ6DRA6 164 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 LHFPL2Q6ZUX7 228 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 SYS1Q8N2H4 156 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 APH1BQ8WW43 257 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 RFT1Q96AA3 541 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 SPSB1Q96BD6 273 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 OPALINQ96PE5 141 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 ALG8Q9BVK2 526 aa15□□□□□ -0.01
COL7A1-209ENST00000474432 MRPS18AQ9NVS2 196 aaKnown RBP15□□□□□ -0.01
COL7A1-209ENST00000474432 TET2Q6N021 2002 aaPredicted RBP14.99□□□□□ -0.01
COL7A1-209ENST00000474432 MMP23AO75900 390 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 KDM4BO94953 1096 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 ZNF20P17024 532 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 JUNBP17275 347 aaPredicted RBP14.99□□□□□ -0.01
COL7A1-209ENST00000474432 PRKACAP17612 351 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 LGALS4P56470 323 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 GRK1Q15835 563 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 OR13C9Q8NGT0 318 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 ZNF714Q96N38 554 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 C9orf16Q9BUW7 83 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 RANBP3Q9H6Z4 567 aaPredicted RBP14.99□□□□□ -0.01
COL7A1-209ENST00000474432 FAM118AQ9NWS6 357 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 ERVK13-1Q9NX77 482 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 TBL2Q9Y4P3 447 aaKnown RBP14.99□□□□□ -0.01
COL7A1-209ENST00000474432 LINC00312Q9Y6C7 94 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 TGP01266 2768 aa14.99□□□□□ -0.01
COL7A1-209ENST00000474432 LOC100130705A0A1B0GUX0 176 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 hADV38S2A0JD32 116 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 A6NDX4 124 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 ZFPL1O95159 310 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 ARG1P05089 322 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 GABRR1P24046 479 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 LMO1P25800 156 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 PEX2P28328 305 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 ERP29P30040 261 aaKnown RBP14.98□□□□□ -0.01
COL7A1-209ENST00000474432 SNU13P55769 128 aaKnown RBP14.98□□□□□ -0.01
COL7A1-209ENST00000474432 ACTA2P62736 377 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 ACTG2P63267 376 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 PLA1AQ53H76 456 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 SPIN3Q5JUX0 258 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 BAIAP2L2Q6UXY1 529 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 PQLC1Q8N2U9 271 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 OR52I1Q8NGK6 324 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 OR5D18Q8NGL1 313 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 OR13C3Q8NGS6 347 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 OR13D1Q8NGV5 346 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 CFHR4Q92496 578 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 MALSU1Q96EH3 234 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 FOXJ3Q9UPW0 622 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 TCF19Q9Y242 345 aa14.98□□□□□ -0.01
COL7A1-209ENST00000474432 SNTNA6NMZ2 147 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 SIRPB1O00241 398 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 MGST3O14880 152 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 OR2H2O95918 312 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 P2RX3P56373 397 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 ZP1P60852 638 aa14.97□□□□□ -0.01
COL7A1-209ENST00000474432 SSX2Q16385 188 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms