RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 DOC2AQ14183 400 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 ZNF235Q14590 738 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 ARHGAP19Q14CB8 494 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 SSX2Q16385 188 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 COA6Q5JTJ3 125 aaKnown RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 LRRC66Q68CR7 880 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 PTRHD1Q6GMV3 140 aaKnown RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 METAP1DQ6UB28 335 aaPredicted RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 SBSNQ6UWP8 590 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 RPS27LQ71UM5 84 aaKnown RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 GLT6D1Q7Z4J2 308 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 SLC51BQ86UW2 128 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 MSRB3Q8IXL7 192 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 CPNE9Q8IYJ1 553 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 OFCC1Q8IZS5 231 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 LINC00471Q8N535 108 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 HSD17B11Q8NBQ5 300 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 DUSP18Q8NEJ0 188 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 OR56B2PQ8NGI1 322 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 OR13C4Q8NGS5 318 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 MCFD2Q8NI22 146 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 RNASE11Q8TAA1 199 aaKnown RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 GRPEL2Q8TAA5 225 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 CD200R1Q8TD46 325 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 PIH1D2Q8WWB5 315 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 CAPSLQ8WWF8 208 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 ZHX1-C8orf76Q96EF9 292 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 TPD52L3Q96J77 140 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 TRNT1Q96Q11 434 aaKnown RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 TMEM175Q9BSA9 504 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 DOHHQ9BU89 302 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 NAA50Q9GZZ1 169 aaKnown RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 TMEM38AQ9H6F2 299 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 TRIM45Q9H8W5 580 aaPredicted RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 REEP1Q9H902 201 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 UCK1Q9HA47 277 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 LRTM1Q9HBL6 345 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 ISYNA1Q9NPH2 558 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 RPRD1BQ9NQG5 326 aaKnown RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 OPTCQ9UBM4 332 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 ZNF282Q9UDV7 671 aaPredicted RBP2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 KLK12Q9UKR0 248 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 GINS2Q9Y248 185 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 STARD10Q9Y365 291 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 SNX10Q9Y5X0 201 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 ARL5AQ9Y689 179 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 V9GYQ6 96 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 COL4A5P29400 1685 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 PTPRFP10586 1907 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 PARP14Q460N5 1801 aa2.17□□□□□ -2.06
TMEM50B-208ENST00000474272 MYH9P35579 1960 aaKnown RBP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 DOCK5Q9H7D0 1870 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 ADAMTSL1Q8N6G6 1762 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 IGLV3-16A0A075B6K0 115 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 TRAV6A0A075B6T7 132 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 CCL15-CCL14A0A0B4J2E2 113 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 A0A1B0GTQ1 180 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 IRGMA1A4Y4 181 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 PRSS37A4D1T9 235 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 EFCAB10A6NFE3 127 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 OR51F1A6NGY5 319 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 ZNF716A6NP11 495 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 CENPXA8MT69 81 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 FAM25AB3EWG3 89 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 FAM25CB3EWG5 89 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 FAM25GB3EWG6 89 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 CCRL2O00421 344 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 SNAI2O43623 268 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 GATCO43716 136 aaKnown RBP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 AIREO43918 545 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 WBP4O75554 376 aaKnown RBP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 EIF3GO75821 320 aaKnown RBP eCLIP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 CCNKO75909 580 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 SLC25A14O95258 325 aaPredicted RBP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 TSPAN13O95857 204 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 CD160O95971 181 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 TRBC1P01850 177 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 TFPTP0C1Z6 253 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 OR56A5P0C7T3 313 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 ZNF735P0CB33 412 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 ZNF286BP0CG31 522 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 HMGA1P17096 107 aaKnown RBP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 GALP22466 123 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 CPN2P22792 545 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 F8A1P23610 371 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 ERP29P30040 261 aaKnown RBP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 SERPINB1P30740 379 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 EVI2BP34910 448 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 BMI1P35226 326 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 SPAM1P38567 509 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 CDKN1BP46527 198 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 RGS6P49758 472 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 PSMD4P55036 377 aaKnown RBP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 RAB25P57735 213 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 SMIM11AP58511 58 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 MTPNP58546 118 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 CDC42P60953 191 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 UBE2IP63279 158 aaKnown RBP2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 IL5RAQ01344 420 aa2.16□□□□□ -2.06
TMEM50B-208ENST00000474272 GGTLC2Q14390 218 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms