RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 S100A13Q99584 98 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 CHIAQ9BZP6 476 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 CHST6Q9GZX3 395 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 FAM234AQ9H0X4 552 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 UNKLQ9H9P5 680 aaKnown RBP9.46□□□□□ -0.9
CPNE1-222ENST00000473373 EXOSC4Q9NPD3 245 aaKnown RBP9.46□□□□□ -0.9
CPNE1-222ENST00000473373 RBFOX1Q9NWB1 397 aaKnown RBP9.46□□□□□ -0.9
CPNE1-222ENST00000473373 MTCH1Q9NZJ7 389 aa9.46□□□□□ -0.9
CPNE1-222ENST00000473373 SIRPB1O00241 398 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 SH2D1BO14796 132 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 MYL12BO14950 172 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 SULT1B1O43704 296 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 ZFPL1O95159 310 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 IGHV4-59P01825 116 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 CCL3L1P16619 93 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 RAB3AP20336 220 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 CAPGP40121 348 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 NPBWR2P48146 333 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 COMPP49747 757 aaPredicted RBP9.45□□□□□ -0.9
CPNE1-222ENST00000473373 UBE2E1P51965 193 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 GTF2A1P52655 376 aaPredicted RBP9.45□□□□□ -0.9
CPNE1-222ENST00000473373 DYNC1I2Q13409 638 aaKnown RBP9.45□□□□□ -0.9
CPNE1-222ENST00000473373 IL18R1Q13478 541 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 OR2G6Q5TZ20 316 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 DHRS7BQ6IAN0 325 aaPredicted RBP9.45□□□□□ -0.9
CPNE1-222ENST00000473373 GDPGP1Q6ZNW5 385 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 C17orf107Q6ZR85 190 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 C1orf122Q6ZSJ8 110 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 STX19Q8N4C7 294 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 TMEM86BQ8N661 226 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 Q8N7P7 452 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 TMEM80Q96HE8 168 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 SNX22Q96L94 193 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 HES4Q9HCC6 221 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 FGF20Q9NP95 211 aaPredicted RBP9.45□□□□□ -0.9
CPNE1-222ENST00000473373 ING3Q9NXR8 418 aa9.45□□□□□ -0.9
CPNE1-222ENST00000473373 IGKV1-9A0A0C4DH69 117 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 PNMA8CA0A1B0GUJ8 204 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 hADV38S2A0JD32 116 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 FUOMA2VDF0 154 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 ERICH4A6NGS2 130 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 E9PI62 339 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 E9PQ18 207 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 F8VVB4 439 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 F8VWA3 439 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 H0YHG0 523 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 K7N7A8 449 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 WBP4O75554 376 aaKnown RBP9.44□□□□□ -0.9
CPNE1-222ENST00000473373 MDKP21741 143 aaPredicted RBP9.44□□□□□ -0.9
CPNE1-222ENST00000473373 ETV1P50549 477 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 RAG2P55895 527 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 ERVK11-1P61568 191 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 ACSM1Q08AH1 577 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 PDZK1IP1Q13113 114 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 ZNF273Q14593 569 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 SPIN3Q5JUX0 258 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 RPL22L1Q6P5R6 122 aaKnown RBP9.44□□□□□ -0.9
CPNE1-222ENST00000473373 OR8H2Q8N162 312 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 OR13D1Q8NGV5 346 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 GPR148Q8TDV2 347 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 DYRK2Q92630 601 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 TAF15Q92804 592 aaKnown RBP eCLIP9.44□□□□□ -0.9
CPNE1-222ENST00000473373 ZNF714Q96N38 554 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 NR1H4Q96RI1 486 aaPredicted RBP9.44□□□□□ -0.9
CPNE1-222ENST00000473373 DCLRE1BQ9H816 532 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 BEX1Q9HBH7 125 aa9.44□□□□□ -0.9
CPNE1-222ENST00000473373 MRPS18AQ9NVS2 196 aaKnown RBP9.44□□□□□ -0.9
CPNE1-222ENST00000473373 EFCAB10A6NFE3 127 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 GPR137BO60478 399 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 ARG1P05089 322 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 LIMS3P0CW19 117 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 LIMS4P0CW20 117 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 ZNF728P0DKX0 622 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 IER3P46695 156 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 ST3GAL4Q11206 333 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 CDK5R1Q15078 307 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 RSU1Q15404 277 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 KISS1Q15726 138 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 CCDC58Q4VC31 144 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 PLA1AQ53H76 456 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 SHISA2Q6UWI4 295 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 AHSA2Q719I0 299 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 LDLRAD3Q86YD5 345 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 TPRX1Q8N7U7 411 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 BPIFB6Q8NFQ5 453 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 TNFAIP8L1Q8WVP5 186 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 TMEM106AQ96A25 262 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 JAM3Q9BX67 310 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 ABCB10Q9NRK6 738 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 TAS2R4Q9NYW5 299 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 ZNRD1Q9P1U0 126 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 IL36RNQ9UBH0 155 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 CKLFQ9UBR5 152 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 DIMT1Q9UNQ2 313 aaKnown RBP9.43□□□□□ -0.9
CPNE1-222ENST00000473373 HSPE1-MOB4S4R3N1 261 aa9.43□□□□□ -0.9
CPNE1-222ENST00000473373 TRGV10A0A0A0MS01 117 aa9.42□□□□□ -0.9
CPNE1-222ENST00000473373 A0A1B0GUS0 222 aa9.42□□□□□ -0.9
CPNE1-222ENST00000473373 POM121CA8CG34 1229 aa9.42□□□□□ -0.9
CPNE1-222ENST00000473373 HSPB6O14558 160 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms