RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 GRK1Q15835 563 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 SPIN3Q5JUX0 258 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 DHRS7BQ6IAN0 325 aaPredicted RBP15.9■□□□□ 0.14
COMMD1-208ENST00000472729 OR8H2Q8N162 312 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 DHRSXQ8N5I4 330 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 OR51A4Q8NGJ6 313 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 OR13D1Q8NGV5 346 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 TAF15Q92804 592 aaKnown RBP eCLIP15.9■□□□□ 0.14
COMMD1-208ENST00000472729 RNF166Q96A37 237 aaPredicted RBP15.9■□□□□ 0.14
COMMD1-208ENST00000472729 RFT1Q96AA3 541 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 MRPS18AQ9NVS2 196 aaKnown RBP15.9■□□□□ 0.14
COMMD1-208ENST00000472729 RBFOX1Q9NWB1 397 aaKnown RBP15.9■□□□□ 0.14
COMMD1-208ENST00000472729 C1RLQ9NZP8 487 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.9■□□□□ 0.14
COMMD1-208ENST00000472729 ZNRD1Q9P1U0 126 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 VPREB3Q9UKI3 123 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 MMP24Q9Y5R2 645 aa15.9■□□□□ 0.14
COMMD1-208ENST00000472729 F8VVB4 439 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 F8VWA3 439 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 SULT1B1O43704 296 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 ZFPL1O95159 310 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 NDUFA7O95182 113 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 CCL3L1P16619 93 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 MEF2CQ06413 473 aaPredicted RBP15.89■□□□□ 0.13
COMMD1-208ENST00000472729 CCDC58Q4VC31 144 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 OR5D18Q8NGL1 313 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 OR10AC1Q8NH08 325 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 GPER1Q99527 375 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 PDCD1LG2Q9BQ51 273 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 SLITRK2Q9H156 845 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 RHOFQ9HBH0 211 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 EXOSC4Q9NPD3 245 aaKnown RBP15.89■□□□□ 0.13
COMMD1-208ENST00000472729 GSTK1Q9Y2Q3 226 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 DOCK11Q5JSL3 2073 aa15.89■□□□□ 0.13
COMMD1-208ENST00000472729 FUOMA2VDF0 154 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 MT-ND2P03891 347 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 ZNF728P0DKX0 622 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 CALCBP10092 127 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 RAB3AP20336 220 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 DUSP1P28562 367 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 NPBWR2P48146 333 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 SCN1BQ07699 218 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 ZNF273Q14593 569 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 SMN1Q16637 294 aaKnown RBP15.88■□□□□ 0.13
COMMD1-208ENST00000472729 ZNF691Q5VV52 312 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 OLFML2AQ68BL7 652 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 ZNF782Q6ZMW2 699 aaPredicted RBP15.88■□□□□ 0.13
COMMD1-208ENST00000472729 TRAPPC6BQ86SZ2 158 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 BEND2Q8NDZ0 799 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 CNIH3Q8TBE1 160 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 APH1BQ8WW43 257 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 ZNF714Q96N38 554 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 SPACA5Q96QH8 159 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 CHST6Q9GZX3 395 aa15.88■□□□□ 0.13
COMMD1-208ENST00000472729 FGF20Q9NP95 211 aaPredicted RBP15.88■□□□□ 0.13
COMMD1-208ENST00000472729 CLPSL1A2RUU4 121 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 CLIC3O95833 236 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 TGFBR2P37173 567 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 BMXP51813 675 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 DYNC1I2Q13409 638 aaKnown RBP15.87■□□□□ 0.13
COMMD1-208ENST00000472729 IL18R1Q13478 541 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 RPL22L1Q6P5R6 122 aaKnown RBP15.87■□□□□ 0.13
COMMD1-208ENST00000472729 SATL1Q86VE3 508 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 SAXO1Q8IYX7 474 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 GPR148Q8TDV2 347 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 SEBOXQ9HB31 216 aaPredicted RBP15.87■□□□□ 0.13
COMMD1-208ENST00000472729 HMG20AQ9NP66 347 aa15.87■□□□□ 0.13
COMMD1-208ENST00000472729 EXOSC1Q9Y3B2 195 aaKnown RBP15.87■□□□□ 0.13
COMMD1-208ENST00000472729 E9PI62 339 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 SIRPB1O00241 398 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 MGST3O14880 152 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 ZNF737O75373 536 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 WBP4O75554 376 aaKnown RBP15.86■□□□□ 0.13
COMMD1-208ENST00000472729 RBP4P02753 201 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 ZNF44P15621 663 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 SOX2P48431 317 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 PPP3R1P63098 170 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 ZNF146Q15072 292 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 KISS1Q15726 138 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 TAF9Q16594 264 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 BRICD5Q6PL45 260 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 PARP16Q8N5Y8 322 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 TMEM80Q96HE8 168 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 SSX3Q99909 188 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 JAM3Q9BX67 310 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 RAB18Q9NP72 206 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 BABAM2Q9NXR7 383 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 RNF114Q9Y508 228 aa15.86■□□□□ 0.13
COMMD1-208ENST00000472729 TRGV10A0A0A0MS01 117 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 TMEM82A0PJX8 343 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 MEX3AA1L020 520 aaKnown RBP15.85■□□□□ 0.13
COMMD1-208ENST00000472729 H3BUI4 141 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 H3BUX3 64 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 DEGS1O15121 323 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 KDM4BO94953 1096 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 ALX3O95076 343 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 ARG1P05089 322 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 LIMS3P0CW19 117 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 LIMS4P0CW20 117 aa15.85■□□□□ 0.13
COMMD1-208ENST00000472729 ETV1P50549 477 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms