RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 IL13RA2Q14627 380 aa16.61■□□□□ 0.25
SF1-213ENST00000472725 C22orf42Q6IC83 251 aa16.61■□□□□ 0.25
SF1-213ENST00000472725 TPRA1Q86W33 373 aa16.61■□□□□ 0.25
SF1-213ENST00000472725 CD177Q8N6Q3 437 aa16.61■□□□□ 0.25
SF1-213ENST00000472725 OR6M1Q8NGM8 313 aa16.61■□□□□ 0.25
SF1-213ENST00000472725 YIPF6Q96EC8 236 aa16.61■□□□□ 0.25
SF1-213ENST00000472725 POM121Q96HA1 1249 aa16.61■□□□□ 0.25
SF1-213ENST00000472725 ELL3Q9HB65 397 aaPredicted RBP16.61■□□□□ 0.25
SF1-213ENST00000472725 EXOSC4Q9NPD3 245 aaKnown RBP16.61■□□□□ 0.25
SF1-213ENST00000472725 ING4Q9UNL4 249 aa16.61■□□□□ 0.25
SF1-213ENST00000472725 A8MV72 311 aaPredicted RBP16.6■□□□□ 0.25
SF1-213ENST00000472725 J3QLI3 93 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 LIPFP07098 398 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 ZFP36P26651 326 aaKnown RBP16.6■□□□□ 0.25
SF1-213ENST00000472725 CFPP27918 469 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 CAPZA1P52907 286 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 DGUOKQ16854 277 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 AWAT2Q6E213 333 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 GLIPR1L1Q6UWM5 242 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 LINC00596Q86U02 117 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 FAM216BQ8N7L0 139 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 CHST4Q8NCG5 386 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 PPP1R35Q8TAP8 253 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 KCTD7Q96MP8 289 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 SMR3AQ99954 134 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 HIF1ANQ9NWT6 349 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 SLC25A10Q9UBX3 287 aaPredicted RBP16.6■□□□□ 0.25
SF1-213ENST00000472725 OR14J1Q9UGF5 321 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 MAB21L2Q9Y586 359 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 V9GY05 133 aa16.6■□□□□ 0.25
SF1-213ENST00000472725 LOC105371242A0A075B767 164 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 A0A0G2JMP0 313 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 A0A0X1KG70 313 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 SLC17A2O00624 439 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 SLC22A1O15245 554 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 PHF1O43189 567 aaPredicted RBP16.59■□□□□ 0.25
SF1-213ENST00000472725 CDRT1O95170 752 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 HAND1O96004 215 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 GTF2F2P13984 249 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 GADD45AP24522 165 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 LMO1P25800 156 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 HTR2CP28335 458 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 LCN2P80188 198 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 BATF2Q8N1L9 274 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 OSR2Q8N2R0 312 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 TEX29Q8N6K0 151 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 OR4M2Q8NGB6 313 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 OR4D6Q8NGJ1 314 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 OR5D13Q8NGL4 314 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 OR13F1Q8NGS4 319 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 RAB40AQ8WXH6 277 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 SNX22Q96L94 193 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 CST11Q9H112 138 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 OR51E2Q9H255 320 aa16.59■□□□□ 0.25
SF1-213ENST00000472725 CSPG4Q6UVK1 2322 aa16.58■□□□□ 0.25
SF1-213ENST00000472725 H3BUI4 141 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 K7N7A8 449 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 ENSAO43768 121 aaKnown RBP16.58■□□□□ 0.24
SF1-213ENST00000472725 HTR3BO95264 441 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 RAB3BP20337 219 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 PAX2Q02962 417 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 IKZF1Q13422 519 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 BTNL3Q6UXE8 466 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 ZNRF1Q8ND25 227 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 DACT3Q96B18 629 aaPredicted RBP16.58■□□□□ 0.24
SF1-213ENST00000472725 C1orf147Q96MC9 270 aaPredicted RBP16.58■□□□□ 0.24
SF1-213ENST00000472725 CHCHD6Q9BRQ6 235 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 GSX1Q9H4S2 264 aaPredicted RBP16.58■□□□□ 0.24
SF1-213ENST00000472725 IFT22Q9H7X7 185 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 LPAR2Q9HBW0 351 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 YAE1D1Q9NRH1 226 aa16.58■□□□□ 0.24
SF1-213ENST00000472725 AK6Q9Y3D8 172 aaKnown RBP16.58■□□□□ 0.24
SF1-213ENST00000472725 TRBV23-1A0A0A0MS06 115 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 IGHV2-70DA0A0C4DH43 119 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 KIR2DS1A0A191URI9 304 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 ZNF737O75373 536 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 BPNT1O95861 308 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 TK1P04183 234 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 ALDH3B2P48448 385 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 COL10A1Q03692 680 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 MPV17LQ2QL34 196 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 SLC22A6Q4U2R8 563 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 DCAF12L2Q5VW00 463 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 TMEM185AQ8NFB2 350 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 C8orf46Q8TAG6 207 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 ST8SIA4Q92187 359 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 GFI1Q99684 422 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 PLGRKTQ9HBL7 147 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 ST3GAL6Q9Y274 331 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 INSIG2Q9Y5U4 225 aa16.57■□□□□ 0.24
SF1-213ENST00000472725 A0A1B0GW55 424 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A10PA6NDY2 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A18PA6NE21 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A16PA6NEW6 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A20PA6NIJ5 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A8PA6NJQ4 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A7PA6NKC0 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A22PA8MWA6 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A12PA8MX19 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A5PA8MXJ8 464 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms