RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 DDI2Q5TDH0 399 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 GLT8D1Q68CQ7 371 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 SFXN4Q6P4A7 337 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 LHFPL2Q6ZUX7 228 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 MOB3CQ70IA8 216 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 SPERTQ8NA61 448 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 OR5A2Q8NGI9 324 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 OR13G1Q8NGZ3 307 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 OR4F5Q8NH21 305 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 AP3S1Q92572 193 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 NEIL1Q96FI4 390 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-206ENST00000471037 MEGF10Q96KG7 1140 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 CITED1Q99966 193 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 MICU1Q9BPX6 476 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 TMEM246Q9BRR3 403 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 UQCC2Q9BRT2 126 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 ADAT1Q9BUB4 502 aaKnown RBP7.53□□□□□ -1.2
SF3A1-206ENST00000471037 BEX1Q9HBH7 125 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 GPR173Q9NS66 373 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 TMEM100Q9NV29 134 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 AK6Q9Y3D8 172 aaKnown RBP7.53□□□□□ -1.2
SF3A1-206ENST00000471037 SOX21Q9Y651 276 aaPredicted RBP7.53□□□□□ -1.2
SF3A1-206ENST00000471037 VWFP04275 2813 aa7.53□□□□□ -1.2
SF3A1-206ENST00000471037 PQLC2LA1A4F0 135 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 FAM181BA6NEQ2 426 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 IFITM5A6NNB3 132 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 AIPO00170 330 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 SLC17A2O00624 439 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 NDUFA7O95182 113 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 CYB5R3P00387 301 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 CLEC2LP0C7M8 214 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 CD37P11049 281 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 ZNF182P17025 639 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 CA6P23280 308 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 ZNF93P35789 620 aaPredicted RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 PITPNBP48739 271 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 SRP9P49458 86 aaKnown RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 RBP2P50120 134 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 CAPZA1P52907 286 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 RAG2P55895 527 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 OR10A3P58181 314 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 RPL15P61313 204 aaKnown RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 GNG3P63215 75 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 DYNC1I2Q13409 638 aaKnown RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 OR8G1Q15617 311 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 DGUOKQ16854 277 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 DEFB112Q30KQ8 113 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 C1orf100Q5SVJ3 147 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 C17orf107Q6ZR85 190 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 NLRC3Q7RTR2 1065 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 NR2C2APQ86WQ0 139 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 JAGN1Q8N5M9 183 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 TMEM86BQ8N661 226 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 PNLDC1Q8NA58 520 aaKnown RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 OR10AD1Q8NGE0 317 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 OR8B3Q8NGG8 313 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 OR52N4Q8NGI2 321 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 OR8S1Q8NH09 359 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 HPSE2Q8WWQ2 592 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 OR5P3Q8WZ94 311 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 KCTD12Q96CX2 325 aaKnown RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 ITPKCQ96DU7 683 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 BORCS8Q96FH0 119 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 OR8B2Q96RD0 313 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 GFI1Q99684 422 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 NUDT16L1Q9BRJ7 211 aaKnown RBP7.52□□□□□ -1.21
SF3A1-206ENST00000471037 DCUN1D5Q9BTE7 237 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 RTL8AQ9BWD3 113 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 MMP27Q9H306 513 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 PTTG2Q9NZH5 202 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 CMYA5Q8N3K9 4069 aa7.52□□□□□ -1.21
SF3A1-206ENST00000471037 SMIM30A4D0T7 59 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 TMEM210A6NLX4 147 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 LRRC30A6NM36 301 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 M0QZ24 198 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 MLNRO43193 412 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 ZNF205O95201 554 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 GATA4P43694 442 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 ATP1B3P54709 279 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 MTCP1P56278 107 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 CAV3P56539 151 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 SCAND1P57086 179 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 RELBQ01201 579 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 SRSF4Q08170 494 aaKnown RBP7.51□□□□□ -1.21
SF3A1-206ENST00000471037 KISS1Q15726 138 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 RAB11BQ15907 218 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 GPR157Q5UAW9 335 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 WDR25Q64LD2 544 aaPredicted RBP7.51□□□□□ -1.21
SF3A1-206ENST00000471037 OLFML2AQ68BL7 652 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 FIP1L1Q6UN15 594 aaKnown RBP7.51□□□□□ -1.21
SF3A1-206ENST00000471037 BRD3OSQ6XYD6 125 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 Q6YL49 198 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 DCDC5Q6ZRR9 648 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 LYPD6Q86Y78 171 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 C1orf87Q8N0U7 546 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 KIR3DL3Q8N743 410 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 OR6M1Q8NGM8 313 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 TRMT10AQ8TBZ6 339 aaKnown RBP7.51□□□□□ -1.21
SF3A1-206ENST00000471037 NPRL2Q8WTW4 380 aa7.51□□□□□ -1.21
SF3A1-206ENST00000471037 ACOT12Q8WYK0 555 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms