RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TAS2R8Q9NYW2 309 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 MTFP1Q9UDX5 166 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 ZNF107Q9UII5 783 aaPredicted RBP12.79□□□□□ -0.36
COL4A5-203ENST00000470339 CACNA1DQ01668 2161 aa12.79□□□□□ -0.36
COL4A5-203ENST00000470339 HELZ2Q9BYK8 2649 aaKnown RBP12.78□□□□□ -0.36
COL4A5-203ENST00000470339 MEIOCA2RUB1 952 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 CLEC18AA5D8T8 446 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 A6NNC1 897 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 HS3ST1O14792 307 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 ORC5O43913 435 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 PDCD6O75340 191 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 NXPH2O95156 264 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 GNB3P16520 340 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 AP3S2P59780 193 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 SNRPD2P62316 118 aaKnown RBP12.78□□□□□ -0.36
COL4A5-203ENST00000470339 SRSF1Q07955 248 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL4A5-203ENST00000470339 ASAH1Q13510 395 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 RGS21Q2M5E4 152 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 CLEC18BQ6UXF7 455 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 ZNF826PQ6ZT77 177 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 CLEC18CQ8NCF0 446 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 ZNF488Q96MN9 340 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 GCM1Q9NP62 436 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 DYNLRB1Q9NP97 96 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 UFSP2Q9NUQ7 469 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 RCC2Q9P258 522 aaKnown RBP12.78□□□□□ -0.36
COL4A5-203ENST00000470339 GLS2Q9UI32 602 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 KCNK7Q9Y2U2 307 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 RAI1Q7Z5J4 1906 aaPredicted RBP12.78□□□□□ -0.36
COL4A5-203ENST00000470339 TANC2Q9HCD6 1990 aa12.78□□□□□ -0.36
COL4A5-203ENST00000470339 GCN1Q92616 2671 aaKnown RBP12.77□□□□□ -0.36
COL4A5-203ENST00000470339 PKDREJQ9NTG1 2253 aa12.77□□□□□ -0.36
COL4A5-203ENST00000470339 TMEM235A6NFC5 223 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 SRRM5B3KS81 715 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 IFNL4K9M1U5 179 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 LANCL1O43813 399 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 LHBP01229 141 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 CD3GP09693 182 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 GDNFP39905 211 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 CBX5P45973 191 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 PPOXP50336 477 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 ACTBP60709 375 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 ACTG1P63261 375 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 DYRK1AQ13627 763 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 SMIM21Q3B7S5 101 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 AGAP6Q5VW22 663 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 ACP7Q6ZNF0 438 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 MOGAT3Q86VF5 341 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 MINDY2Q8NBR6 621 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 OR11L1Q8NGX0 322 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 LRRC29Q8WV35 223 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 HPS1Q92902 700 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 C7orf50Q9BRJ6 194 aaKnown RBP12.77□□□□□ -0.37
COL4A5-203ENST00000470339 ZMAT3Q9HA38 289 aaKnown RBP12.77□□□□□ -0.37
COL4A5-203ENST00000470339 CBLN4Q9NTU7 201 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 DECR2Q9NUI1 292 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 KLK11Q9UBX7 282 aa12.77□□□□□ -0.37
COL4A5-203ENST00000470339 hCG_1807616A0A1W2PRN6 198 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 ANKRD20A5PA0PJZ0 165 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 FAM221AA4D161 298 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 SH2D1BO14796 132 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 OR7C1O76099 320 aaPredicted RBP12.76□□□□□ -0.37
COL4A5-203ENST00000470339 PTTG1O95997 202 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 KNG1P01042 644 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 CSF1P09603 554 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 RNF224P0DH78 156 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 PTHLHP12272 177 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 GLRA1P23415 457 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 GNG2P59768 71 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 ZNF57Q68EA5 555 aaPredicted RBP12.76□□□□□ -0.37
COL4A5-203ENST00000470339 C6orf201Q7Z4U5 140 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 DTX2Q86UW9 622 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 TOMM5Q8N4H5 51 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 POC5Q8NA72 575 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 CHPT1Q8WUD6 406 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 GCDHQ92947 438 aaPredicted RBP12.76□□□□□ -0.37
COL4A5-203ENST00000470339 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 OCSTAMPQ9BR26 566 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 RNF7Q9UBF6 113 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 TBC1D24Q9ULP9 559 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 PPP1R3CQ9UQK1 317 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 NPTNQ9Y639 398 aa12.76□□□□□ -0.37
COL4A5-203ENST00000470339 HRNRQ86YZ3 2850 aaPredicted RBP12.75□□□□□ -0.37
COL4A5-203ENST00000470339 IGHV3-64DA0A0J9YX35 117 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 LRRC30A6NM36 301 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 CENPXA8MT69 81 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 DEGS1O15121 323 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 PLA2G10O15496 165 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 PLA2G2AP14555 144 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 RCVRNP35243 200 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 CCL8P80075 99 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 GUCA2AQ02747 115 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 IKZF1Q13422 519 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 ARFRP1Q13795 201 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 KLF9Q13886 244 aaPredicted RBP12.75□□□□□ -0.37
COL4A5-203ENST00000470339 RBM39Q14498 530 aaKnown RBP12.75□□□□□ -0.37
COL4A5-203ENST00000470339 SPRNQ5BIV9 151 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 MZT2BQ6NZ67 158 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 Q6P435 159 aa12.75□□□□□ -0.37
COL4A5-203ENST00000470339 BATF2Q8N1L9 274 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms