RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 MOGAT2Q3SYC2 334 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 ATPAF1Q5TC12 328 aaPredicted RBP9.41□□□□□ -0.9
SREBF1-209ENST00000470247 STUMQ69YW2 141 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 MZT2AQ6P582 158 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 RTN4RL2Q86UN3 420 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 KRTAP1-3Q8IUG1 177 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 C1orf87Q8N0U7 546 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 LRRC75A-AS1Q8N1F1 130 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 SAMD12Q8N8I0 201 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 DEFB108BQ8NET1 73 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 OR6Q1Q8NGQ2 317 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 NINJ1Q92982 152 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 PERPQ96FX8 193 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 POM121Q96HA1 1249 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 MYOZ1Q9NP98 299 aaPredicted RBP9.41□□□□□ -0.9
SREBF1-209ENST00000470247 PCDHB16Q9NRJ7 776 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 RHBDL2Q9NX52 303 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 PTTG2Q9NZH5 202 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 NLKQ9UBE8 527 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 METRNQ9UJH8 293 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 ST3GAL6Q9Y274 331 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 WIPI2Q9Y4P8 454 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 MED13LQ71F56 2210 aa9.41□□□□□ -0.9
SREBF1-209ENST00000470247 PRRC2AP48634 2157 aaKnown RBP9.4□□□□□ -0.9
SREBF1-209ENST00000470247 TRAV24A0A0B4J272 114 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 A0A1B0GW55 424 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 OR2AT4A6NND4 320 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 CLDN25C9JDP6 229 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 SOCS1O15524 211 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 CLPXO76031 633 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 APOA1P02647 267 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 GYPAP02724 150 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 DUX4L2P0CJ85 424 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 DUX4L3P0CJ86 424 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 DUX4L4P0CJ87 422 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 DUX4L5P0CJ88 424 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 DUX4L6P0CJ89 424 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 DUX4L7P0CJ90 424 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 LMO1P25800 156 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 PRDX2P32119 198 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 TNFSF8P32971 234 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 CEBPDP49716 269 aaPredicted RBP9.4□□□□□ -0.9
SREBF1-209ENST00000470247 VEGFCP49767 419 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 ART1P52961 327 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 SNU13P55769 128 aaKnown RBP9.4□□□□□ -0.9
SREBF1-209ENST00000470247 BTG1P62324 171 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 SMIM21Q3B7S5 101 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 PLAC9Q5JTB6 97 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 UBE2NLQ5JXB2 153 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 AVPI1Q5T686 147 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 DUX4L9Q6RFH8 374 aaPredicted RBP9.4□□□□□ -0.9
SREBF1-209ENST00000470247 LAX1Q8IWV1 398 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 C10orf105Q8TEF2 133 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 GAL3ST1Q99999 423 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 SOSTQ9BQB4 213 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 TMEM246Q9BRR3 403 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 C6orf62Q9GZU0 229 aaPredicted RBP9.4□□□□□ -0.9
SREBF1-209ENST00000470247 IFT22Q9H7X7 185 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 BARX1Q9HBU1 254 aaPredicted RBP9.4□□□□□ -0.9
SREBF1-209ENST00000470247 RCC2Q9P258 522 aaKnown RBP9.4□□□□□ -0.9
SREBF1-209ENST00000470247 DUX4Q9UBX2 424 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 KCNK7Q9Y2U2 307 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 MAB21L2Q9Y586 359 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 BAHCC1Q9P281 2608 aa9.4□□□□□ -0.9
SREBF1-209ENST00000470247 TRAV38-1A0A0B4J264 116 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 TMEM82A0PJX8 343 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A10PA6NDY2 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A18PA6NE21 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A16PA6NEW6 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A20PA6NIJ5 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A8PA6NJQ4 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A7PA6NKC0 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A22PA8MWA6 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A12PA8MX19 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A5PA8MXJ8 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A23PA8MXZ1 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 VWC2LB2RUY7 222 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
SREBF1-209ENST00000470247 ZNF737O75373 536 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 OR2H2O95918 312 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 HAND1O96004 215 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 CHRM2P08172 466 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A15PP0C7V4 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A13PP0C7W8 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A14PP0C7W9 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 FAM90A24PP0C7X0 464 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 CDK2P24941 298 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 CHATP28329 748 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 PDLIM4P50479 330 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 MICBQ29980 383 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 MPV17LQ2QL34 196 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 SPIN3Q5JUX0 258 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 LYPD2Q6UXB3 125 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 ZNF788Q6ZQV5 615 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 DTX3Q8N9I9 347 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 RAB40AQ8WXH6 277 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 SDSLQ96GA7 329 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 WDFY2Q96P53 400 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 GAFA1Q96PS6 74 aa9.39□□□□□ -0.91
SREBF1-209ENST00000470247 URM1Q9BTM9 101 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms