RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 SLAMF9Q96A28 289 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 LGALS12Q96DT0 336 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 CITED1Q99966 193 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 C16orf95Q9H693 158 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 BLOC1S6Q9UL45 172 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 HHLA2Q9UM44 414 aa15.56■□□□□ 0.08
COL7A1-207ENST00000467985 EFCAB10A6NFE3 127 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 J3QLW9 94 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 ZNF737O75373 536 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 RBP4P02753 201 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 ZNF19P17023 458 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 MTCP1P56278 107 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 LGALS4P56470 323 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 RAB40BQ12829 278 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 TREML4Q6UXN2 200 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 LHFPL2Q6ZUX7 228 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 OR8H2Q8N162 312 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 C11orf42Q8N5U0 333 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 EMG1Q92979 244 aaKnown RBP15.55■□□□□ 0.08
COL7A1-207ENST00000467985 SPSB1Q96BD6 273 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 FGGYQ96C11 551 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 ADAT3Q96EY9 351 aaPredicted RBP15.55■□□□□ 0.08
COL7A1-207ENST00000467985 PELI1Q96FA3 418 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 MEGF9Q9H1U4 602 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 NEK6Q9HC98 313 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 INPP5EQ9NRR6 644 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 TPRKBQ9Y3C4 175 aa15.55■□□□□ 0.08
COL7A1-207ENST00000467985 F8VVB4 439 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 F8VWA3 439 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 XPNPEP2O43895 674 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 TSPAN9O75954 239 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 CLPXO76031 633 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 OCM2P0CE71 109 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 OCMP0CE72 109 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-207ENST00000467985 ATF1P18846 271 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 AZGP1P25311 298 aaKnown RBP15.54■□□□□ 0.08
COL7A1-207ENST00000467985 NANOS3P60323 173 aaKnown RBP15.54■□□□□ 0.08
COL7A1-207ENST00000467985 MEF2CQ06413 473 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-207ENST00000467985 MRPL28Q13084 256 aaKnown RBP15.54■□□□□ 0.08
COL7A1-207ENST00000467985 GALEQ14376 348 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 ZNF273Q14593 569 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 Q6ZSV7 163 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 AHSA2Q719I0 299 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 SYS1Q8N2H4 156 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 STX19Q8N4C7 294 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 C4orf36Q96KX1 117 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 SNX22Q96L94 193 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 SSX3Q99909 188 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 GLS2Q9UI32 602 aa15.54■□□□□ 0.08
COL7A1-207ENST00000467985 IGKV1-9A0A0C4DH69 117 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 TRBV2A0A0J9YWF9 115 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 C17orf98A8MV24 154 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 H3BUX3 64 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 TIMM23O14925 209 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 INMTO95050 263 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 ZNF728P0DKX0 622 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 PIPP12273 146 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-207ENST00000467985 CCL3L1P16619 93 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 EDDM3BP56851 147 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 PROK1P58294 105 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 LRRC75BQ2VPJ9 315 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 SPIN3Q5JUX0 258 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 RBM48Q5RL73 367 aaKnown RBP15.53■□□□□ 0.08
COL7A1-207ENST00000467985 FAM58AQ8N1B3 248 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 ZNF676Q8N7Q3 588 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 OR13C3Q8NGS6 347 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 HAVCR2Q8TDQ0 301 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 ALG8Q9BVK2 526 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 RAB18Q9NP72 206 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 PLCXD1Q9NUJ7 323 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 CHCHD3Q9NX63 227 aaKnown RBP15.53■□□□□ 0.08
COL7A1-207ENST00000467985 CNOT2Q9NZN8 540 aaKnown RBP15.53■□□□□ 0.08
COL7A1-207ENST00000467985 LRRC42Q9Y546 428 aa15.53■□□□□ 0.08
COL7A1-207ENST00000467985 OR4C45A6NMZ5 311 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 PTGES3LE9PB15 166 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 M0QZ24 198 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 HAND1O96004 215 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 IGHA1P01876 353 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 MT-ND2P03891 347 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 CCDC159P0C7I6 412 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 MYL12AP19105 171 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 COX7A1P24310 79 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 POU3F4P49335 361 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 DLX6P56179 175 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 PDZK1IP1Q13113 114 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 ALKBH1Q13686 389 aaKnown RBP15.52■□□□□ 0.08
COL7A1-207ENST00000467985 ZNF146Q15072 292 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 LHFPL3Q86UP9 236 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 OR52I1Q8NGK6 324 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 OR13D1Q8NGV5 346 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 MYDGFQ969H8 173 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 AJUBAQ96IF1 538 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 OPALINQ96PE5 141 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 RHOFQ9HBH0 211 aa15.52■□□□□ 0.08
COL7A1-207ENST00000467985 NOTCH1P46531 2555 aa15.52■□□□□ 0.07
COL7A1-207ENST00000467985 hADV38S2A0JD32 116 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 GABRR1P24046 479 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 SRSF4Q08170 494 aaKnown RBP15.51■□□□□ 0.07
COL7A1-207ENST00000467985 LAIR2Q6ISS4 152 aa15.51■□□□□ 0.07
COL7A1-207ENST00000467985 LIAT1Q6ZQX7 453 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms