RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 LSM5Q9Y4Y9 91 aaKnown RBP12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 IGKV1-27A0A075B6S5 117 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 A0A0J9YW62 118 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 UCP2P55851 309 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 TAF9Q16594 264 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 ASCL4Q6XD76 172 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 YRDCQ86U90 279 aaKnown RBP12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 LRTM2Q8N967 370 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 OR14L1PQ8NHC6 308 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 INTS12Q96CB8 462 aaKnown RBP12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 BSCL2Q96G97 398 aaPredicted RBP12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 AKR1E2Q96JD6 320 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 SCRT1Q9BWW7 348 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 SMIM3Q9BZL3 60 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 NAA60Q9H7X0 242 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 NECAP2Q9NVZ3 263 aa12.78□□□□□ -0.36
PRPF38B-204ENST00000467302 E5RGE8 158 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 TNFSF11O14788 317 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 ANGPTL7O43827 346 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 CHATP28329 748 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 B3GALT5-AS1P59052 145 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 MRPS34P82930 218 aaKnown RBP12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 HGFACQ04756 655 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 C20orf196Q8IYI0 205 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 C2CD4CQ8TF44 421 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 KCNE4Q8WWG9 221 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 FAM212BQ9NTI7 297 aaPredicted RBP12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 KCNIP3Q9Y2W7 256 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 NSG2Q9Y328 171 aa12.77□□□□□ -0.37
PRPF38B-204ENST00000467302 KIAA1549Q9HCM3 1950 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 DNPH1O43598 174 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SPRY1O43609 319 aaPredicted RBP12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 TNFSF15O95150 251 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 IFNA4P05014 189 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 OR5AC1P0C628 307 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 DANCRP0C864 163 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 ZNF728P0DKX0 622 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 OPRM1P35372 400 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 HABP2Q14520 560 aaPredicted RBP12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 RSU1Q15404 277 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 TRIP6Q15654 476 aaKnown RBP12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SP6Q3SY56 376 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 ETV3LQ6ZN32 361 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 PIP4P1Q86T03 277 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 ZFP82Q8N141 532 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 C15orf54Q8N8G6 183 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 OR2AE1Q8NHA4 323 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SFT2D1Q8WV19 159 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SECTM1Q8WVN6 248 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 RTN4IP1Q8WWV3 396 aaPredicted RBP12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 ULBP2Q9BZM5 246 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 WFDC1Q9HC57 220 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 KPTNQ9Y664 436 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 TTC28Q96AY4 2481 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 LRRC3CA6NJW4 275 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 H7C1Q1 480 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SYNGR3O43761 229 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SCGB1D2O95969 90 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SNCAP37840 140 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 HMGN3Q15651 99 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 SWI5Q1ZZU3 235 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 COMMD1Q8N668 190 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 MARS2Q96GW9 593 aaKnown RBP12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 C18orf12Q96KH6 178 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 IP6K3Q96PC2 410 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 GINS3Q9BRX5 216 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 ABI3Q9P2A4 366 aa12.76□□□□□ -0.37
PRPF38B-204ENST00000467302 ZNF850A8MQ14 1090 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 TRAPPC6AO75865 159 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 ZNF205O95201 554 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 RFPL3SP0C7P2 107 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 LMO1P25800 156 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 MEOX2P50222 304 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 RAC3P60763 192 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 RAB35Q15286 201 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 CLEC9AQ6UXN8 241 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 LYZL2Q7Z4W2 148 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 KDF1Q8NAX2 398 aaPredicted RBP12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 TOMM40LQ969M1 308 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 REEP6Q96HR9 211 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 CLCC1Q96S66 551 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 SUCNR1Q9BXA5 334 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 DEPPQ9NTK1 212 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 LRFN1Q9P244 771 aa12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 MRPS18CQ9Y3D5 142 aaKnown RBP12.75□□□□□ -0.37
PRPF38B-204ENST00000467302 FAM230AA0A1W2PPH8 454 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 SGCEO43556 437 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 GPR137BO60478 399 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 TSPAN15O95858 294 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 F10P00742 488 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 P2RY1P47900 373 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 KRTAP27-1Q3LI81 207 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 MIDNQ504T8 468 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 GPR157Q5UAW9 335 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 ABHD17BQ5VST6 288 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 TMEM42Q69YG0 159 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 LIAT1Q6ZQX7 453 aa12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 MSI2Q96DH6 328 aaKnown RBP12.74□□□□□ -0.37
PRPF38B-204ENST00000467302 SRXN1Q9BYN0 137 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms