RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 TP53TG5Q9Y2B4 290 aa15.66■□□□□ 0.1
COL9A3-205ENST00000466192 RP1L1Q8IWN7 2480 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 ZNF732B4DXR9 585 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 AGFG2O95081 481 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 HOXB1P14653 301 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 TAGLNQ01995 201 aaKnown RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 OPCMLQ14982 345 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 KCTD9Q7L273 389 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 LHFPL1Q86WI0 220 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 CXorf67Q86X51 503 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 CCDC120Q96HB5 630 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 CMSS1Q9BQ75 279 aaKnown RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 PDCD10Q9BUL8 212 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 CDH20Q9HBT6 801 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 HEATR1Q9H583 2144 aaKnown RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 ANKRD30BLA7E2S9 258 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 PPP3CBP16298 524 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 OPRM1P35372 400 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 MRPL49Q13405 166 aaKnown RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 DAZAP2Q15038 168 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 OR5A2Q8NGI9 324 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 OR5P3Q8WZ94 311 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 SEC22AQ96IW7 307 aa15.65■□□□□ 0.1
COL9A3-205ENST00000466192 ZNF71Q9NQZ8 489 aaPredicted RBP15.65■□□□□ 0.1
COL9A3-205ENST00000466192 ZGRF1Q86YA3 2104 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 CEACAM18A8MTB9 384 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 J3QW42 95 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 CBR1P16152 277 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 FPR2P25090 351 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 RBM11P57052 281 aaKnown RBP15.64■□□□□ 0.09
COL9A3-205ENST00000466192 TAS2R31P59538 309 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 GMFBP60983 142 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 ERVS71-1P61550 626 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 PPP1CBP62140 327 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 TMEM128Q5BJH2 165 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 FBXW12Q6X9E4 464 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 OR8H3Q8N146 312 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 Q8NFD4 153 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 ASB13Q8WXK3 278 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 SLAMF9Q96A28 289 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 TMEM230Q96A57 120 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 PCDHB16Q9NRJ7 776 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 OSGIN2Q9Y236 505 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 PTPRQQ9UMZ3 2332 aa15.64■□□□□ 0.09
COL9A3-205ENST00000466192 FAM221AA4D161 298 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 OR5H14A6NHG9 310 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 HMSDA8MTL9 139 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 FAM25EA8MYX2 175 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 WDR1O75083 606 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 DUS4LO95620 317 aaKnown RBP15.63■□□□□ 0.09
COL9A3-205ENST00000466192 CFDP00746 253 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-205ENST00000466192 IGKV3-15P01624 115 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 BCL3P20749 454 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 HOXC12P31275 282 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 HIST1H2AAQ96QV6 131 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 OR2J1Q9GZK6 312 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 MSRB2Q9Y3D2 182 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 MPC1Q9Y5U8 109 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 F8VVB4 439 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 F8VWA3 439 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 OR7C1O76099 320 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-205ENST00000466192 EXOSC2Q13868 293 aaKnown RBP15.63■□□□□ 0.09
COL9A3-205ENST00000466192 LRRC37A5PQ49AS3 106 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 C1orf185Q5T7R7 199 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 LPCAT3Q6P1A2 487 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 PEG10Q86TG7 708 aaKnown RBP15.63■□□□□ 0.09
COL9A3-205ENST00000466192 LRRC20Q8TCA0 184 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 EXTL1Q92935 676 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 RTBDNQ9BSG5 229 aaPredicted RBP15.63■□□□□ 0.09
COL9A3-205ENST00000466192 ANXA10Q9UJ72 324 aa15.63■□□□□ 0.09
COL9A3-205ENST00000466192 SPTBN4Q9H254 2564 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 K7ENP7 123 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 C4BPBP20851 252 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 CA6P23280 308 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 GLRA1P23415 457 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 TBR1Q16650 682 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 KRTCAP3Q53RY4 240 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 ZNF324BQ6AW86 544 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-205ENST00000466192 FAM180AQ6UWF9 173 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 C3P1Q6ZMU1 363 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 SAXO1Q8IYX7 474 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 TMEM185AQ8NFB2 350 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 SCGB3A2Q96PL1 93 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 HS3ST6Q96QI5 342 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 MTCH1Q9NZJ7 389 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 TRAV14DV4A0A0A6YYC5 116 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 RFPL4AA6NLU0 287 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 RFPL4AL1F8VTS6 287 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 CD8AP01732 235 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 FCGR3AP08637 254 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 CTRB1P17538 263 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 UCP2P55851 309 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 CTRB2Q6GPI1 263 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 TMEM200AQ86VY9 491 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 SLC25A40Q8TBP6 338 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 MICU1Q9BPX6 476 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 ZNF2Q9BSG1 426 aaPredicted RBP15.62■□□□□ 0.09
COL9A3-205ENST00000466192 EDARQ9UNE0 448 aa15.62■□□□□ 0.09
COL9A3-205ENST00000466192 SYNGR1O43759 233 aa15.61■□□□□ 0.09
COL9A3-205ENST00000466192 PDCD6O75340 191 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms