RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 HSPE1-MOB4S4R3N1 261 aa10.6□□□□□ -0.71
XRN1-203ENST00000463916 PKD1L1Q8TDX9 2849 aa10.6□□□□□ -0.71
XRN1-203ENST00000463916 FAM181BA6NEQ2 426 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 NPFFO15130 113 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 OGG1O15527 345 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 PSPNO60542 156 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 HAND1O96004 215 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 OCM2P0CE71 109 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 OCMP0CE72 109 aaPredicted RBP10.59□□□□□ -0.71
XRN1-203ENST00000463916 SAA4P35542 130 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 UBE2E1P51965 193 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 ZNF529Q6P280 563 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 TMPRSS11AQ6ZMR5 421 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 C8orf59Q8N0T1 100 aaPredicted RBP10.59□□□□□ -0.71
XRN1-203ENST00000463916 OR5D14Q8NGL3 314 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 TSEN15Q8WW01 171 aaKnown RBP10.59□□□□□ -0.71
XRN1-203ENST00000463916 AJUBAQ96IF1 538 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 NKX3-1Q99801 234 aaPredicted RBP10.59□□□□□ -0.71
XRN1-203ENST00000463916 CHST6Q9GZX3 395 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 HMG20AQ9NP66 347 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 TRRAPQ9Y4A5 3859 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 MEIOCA2RUB1 952 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 HAX1O00165 279 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 SULT1B1O43704 296 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 ALX3O95076 343 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 PRKACAP17612 351 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 MYL12AP19105 171 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 OMGP23515 440 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 PAX6P26367 422 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 C21orf33P30042 268 aaPredicted RBP10.59□□□□□ -0.71
XRN1-203ENST00000463916 IER3P46695 156 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 DLX6P56179 175 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 ZP1P60852 638 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 GUCA2AQ02747 115 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 SLC34A1Q06495 639 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 BLMHQ13867 455 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 ZNF146Q15072 292 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 KISS1Q15726 138 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 FIP1L1Q6UN15 594 aaKnown RBP10.59□□□□□ -0.71
XRN1-203ENST00000463916 TCF23Q7RTU1 214 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 Q8IYB0 196 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 OR8H2Q8N162 312 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 TPRX1Q8N7U7 411 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 C3orf56Q8N813 242 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 ZFP41Q8N8Y5 198 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 OR13C5Q8NGS8 318 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 ORAI1Q96D31 301 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 PSORS1C1Q9UIG5 152 aa10.59□□□□□ -0.71
XRN1-203ENST00000463916 EXOSC1Q9Y3B2 195 aaKnown RBP10.59□□□□□ -0.71
XRN1-203ENST00000463916 IRGMA1A4Y4 181 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 ERICH4A6NGS2 130 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 KDM4BO94953 1096 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 CYB5AP00167 134 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 HCKP08631 526 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 EDDM3BP56851 147 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 RELBQ01201 579 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 GABPB1Q06547 395 aaPredicted RBP10.58□□□□□ -0.72
XRN1-203ENST00000463916 NCR3LG1Q68D85 454 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 LDLRAD3Q86YD5 345 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 OR5D13Q8NGL4 314 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 HAVCR2Q8TDQ0 301 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 SSMEM1Q8WWF3 244 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 GHSRQ92847 366 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 SEBOXQ9HB31 216 aaPredicted RBP10.58□□□□□ -0.72
XRN1-203ENST00000463916 TAS2R4Q9NYW5 299 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 GSTK1Q9Y2Q3 226 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 FAM96BQ9Y3D0 163 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 DSCAML1Q8TD84 2053 aa10.58□□□□□ -0.72
XRN1-203ENST00000463916 EEF1B2P24534 225 aaKnown RBP10.57□□□□□ -0.72
XRN1-203ENST00000463916 FOXL1Q12952 345 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 EDDM3AQ14507 147 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 TAF9Q16594 264 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 AHSA2Q719I0 299 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 BPIFB6Q8NFQ5 453 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 OR4S1Q8NGB4 309 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 OR52N1Q8NH53 320 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 GPR148Q8TDV2 347 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 TMEM106AQ96A25 262 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 SMIM19Q96E16 107 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 SNX22Q96L94 193 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 PLCXD1Q9NUJ7 323 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 RPSAP08865 295 aaKnown RBP10.57□□□□□ -0.72
XRN1-203ENST00000463916 TMEM225BP0DP42 221 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 GABRR1P24046 479 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 AQP4P55087 323 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 RPS11P62280 158 aaKnown RBP eCLIP10.57□□□□□ -0.72
XRN1-203ENST00000463916 DMKNQ6E0U4 476 aaPredicted RBP10.57□□□□□ -0.72
XRN1-203ENST00000463916 ZNF782Q6ZMW2 699 aaPredicted RBP10.57□□□□□ -0.72
XRN1-203ENST00000463916 GDPD3Q7L5L3 318 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 TMEM86BQ8N661 226 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 TBC1D15Q8TC07 691 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 PGLYRP3Q96LB9 341 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 NEK6Q9HC98 313 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 CNOT2Q9NZN8 540 aaKnown RBP10.57□□□□□ -0.72
XRN1-203ENST00000463916 ZNRD1Q9P1U0 126 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 ZNF281Q9Y2X9 895 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 POMT1Q9Y6A1 747 aa10.57□□□□□ -0.72
XRN1-203ENST00000463916 EFCAB10A6NFE3 127 aa10.56□□□□□ -0.72
XRN1-203ENST00000463916 C17orf98A8MV24 154 aa10.56□□□□□ -0.72
XRN1-203ENST00000463916 SIRPB1O00241 398 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms