RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 ACTA2P62736 377 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 ACTG2P63267 376 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 DEFA6Q01524 100 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 KPNB1Q14974 876 aaKnown RBP16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 PDLIM3Q53GG5 364 aaPredicted RBP16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 C10orf67Q8IYJ2 551 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 FAM58AQ8N1B3 248 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 OR4C13Q8NGP0 309 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 FGGYQ96C11 551 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 PELI1Q96FA3 418 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 ZNF714Q96N38 554 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 RHOFQ9HBH0 211 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 HHLA2Q9UM44 414 aa16.63■□□□□ 0.25
PDLIM4-205ENST00000463615 OR4C45A6NMZ5 311 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 ALX3O95076 343 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 HTR1AP08908 422 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 PEX2P28328 305 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 EDDM3BP56851 147 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 PDZK1IP1Q13113 114 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 HERPUD1Q15011 391 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 LY6EQ16553 131 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 C2orf68Q2NKX9 166 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 LHFPL4Q7Z7J7 247 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 DYNAPQ8N1N2 210 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 SYS1Q8N2H4 156 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 CBR4Q8N4T8 237 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 OR52N4Q8NGI2 321 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 CFHR4Q92496 578 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 LGALS12Q96DT0 336 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 MRPL48Q96GC5 212 aaKnown RBP16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 OPALINQ96PE5 141 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 NPFFR1Q9GZQ6 430 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 RBFOX1Q9NWB1 397 aaKnown RBP16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 IL36RNQ9UBH0 155 aa16.62■□□□□ 0.25
PDLIM4-205ENST00000463615 MGST3O14880 152 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 CHST1O43916 411 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 MPZL2O60487 215 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 PSPNO60542 156 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 IGHA1P01876 353 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 ZNF20P17024 532 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 BCL3P20749 454 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 ZIK1Q3SY52 487 aaPredicted RBP16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 LDLRAD2Q5SZI1 272 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 Q8N2B8 174 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 RHOXF1Q8NHV9 184 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 ZNF649Q9BS31 505 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 HMG20AQ9NP66 347 aa16.61■□□□□ 0.25
PDLIM4-205ENST00000463615 KDM4BO94953 1096 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 ARG1P05089 322 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 LMO1P25800 156 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 PAX6P26367 422 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 POU3F4P49335 361 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 MRPL28Q13084 256 aaKnown RBP16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 ALKBH1Q13686 389 aaKnown RBP16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 GALEQ14376 348 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 GRK1Q15835 563 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 MINOS1Q5TGZ0 78 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 SAXO1Q8IYX7 474 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 OR10AC1Q8NH08 325 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 OR2T6Q8NHC8 308 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 C4orf36Q96KX1 117 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 INPP5EQ9NRR6 644 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 MRPS18AQ9NVS2 196 aaKnown RBP16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 GLS2Q9UI32 602 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 TCF19Q9Y242 345 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 GMPPBQ9Y5P6 360 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 SESN1Q9Y6P5 492 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 MINOS1-NBL1R4GNA1 71 aa16.6■□□□□ 0.25
PDLIM4-205ENST00000463615 J3QLW9 94 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 TSPAN15O95858 294 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 DBTP11182 482 aaKnown RBP16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 ZNF19P17023 458 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 OR3A1P47881 315 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 Q6ZTK2 550 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 CCDC121Q6ZUS5 278 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 OR4S1Q8NGB4 309 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 OR51A4Q8NGJ6 313 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 Q96MT0 163 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 C9orf16Q9BUW7 83 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 COMMD4Q9H0A8 199 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 SIGLEC9Q9Y336 463 aa16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 UBE2J1Q9Y385 318 aaPredicted RBP16.59■□□□□ 0.25
PDLIM4-205ENST00000463615 IGKV1-12A0A0C4DH73 117 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 A6NDX4 124 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 INMTO95050 263 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 FADS2O95864 444 aaKnown RBP16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 IGKV1D-12P01611 117 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 PRKACAP17612 351 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 GABRR1P24046 479 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 P2RX3P56373 397 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 RAB40BQ12829 278 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 EDDM3AQ14507 147 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 ZBTB49Q6ZSB9 765 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 RPS4Y2Q8TD47 263 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 HAVCR2Q8TDQ0 301 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 ALG8Q9BVK2 526 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 NEK6Q9HC98 313 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 PITPNC1Q9UKF7 332 aa16.58■□□□□ 0.24
PDLIM4-205ENST00000463615 IGHV2-26A0A0B4J1V2 119 aa16.57■□□□□ 0.24
PDLIM4-205ENST00000463615 SH2D1BO14796 132 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms