RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 OR2G6Q5TZ20 316 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 GDPD3Q7L5L3 318 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 OR8H2Q8N162 312 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 TMEM80Q96HE8 168 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 SNX22Q96L94 193 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 SPACA5Q96QH8 159 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 CHIAQ9BZP6 476 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 DPAGT1Q9H3H5 408 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 HEXA-AS1Q9H8Q6 139 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 RHOFQ9HBH0 211 aa13.29□□□□□ -0.28
COL1A1-202ENST00000463440 MEIOCA2RUB1 952 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 FAM181BA6NEQ2 426 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 ANGPTL7O43827 346 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 PAHP00439 452 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 CD2P06729 351 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 PIPP12273 146 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-202ENST00000463440 SAA4P35542 130 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 IER3P46695 156 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 EDDM3BP56851 147 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 ZNF146Q15072 292 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 SAXO1Q8IYX7 474 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 ZSCAN4Q8NAM6 433 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-202ENST00000463440 OR5D18Q8NGL1 313 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 GPR148Q8TDV2 347 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 CPNE2Q96FN4 548 aaPredicted RBP13.28□□□□□ -0.28
COL1A1-202ENST00000463440 HMG20AQ9NP66 347 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 BABAM2Q9NXR7 383 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 PCDHGB5Q9Y5G0 923 aa13.28□□□□□ -0.28
COL1A1-202ENST00000463440 BTBD17A6NE02 478 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 EFCAB10A6NFE3 127 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 MAGEB3O15480 346 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 KDM4BO94953 1096 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 IGHV4-59P01825 116 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 GNAO1P09471 354 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 CCL3L1P16619 93 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 RAB3AP20336 220 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 GABRR1P24046 479 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 DUSP1P28562 367 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 SOX2P48431 317 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 SNU13P55769 128 aaKnown RBP13.27□□□□□ -0.29
COL1A1-202ENST00000463440 ERVFRD-1P60508 538 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 RPL15P61313 204 aaKnown RBP13.27□□□□□ -0.29
COL1A1-202ENST00000463440 ZNF273Q14593 569 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 KISS1Q15726 138 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 MIDNQ504T8 468 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 XAF1Q6GPH4 301 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 PNKDQ8N490 385 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 OR52N1Q8NH53 320 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 PPP1R35Q8TAP8 253 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 RPS4Y2Q8TD47 263 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 DYRK2Q92630 601 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 GGHQ92820 318 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 CNOT2Q9NZN8 540 aaKnown RBP13.27□□□□□ -0.29
COL1A1-202ENST00000463440 ZNRD1Q9P1U0 126 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 IL36RNQ9UBH0 155 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 ANK2Q01484 3957 aa13.27□□□□□ -0.29
COL1A1-202ENST00000463440 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 IGKV1-12A0A0C4DH73 117 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 TMEM82A0PJX8 343 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 SH2D1BO14796 132 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 OGG1O15527 345 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 IGKV1D-12P01611 117 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 TMEM225BP0DP42 221 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 CALCBP10092 127 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 MEF2CQ06413 473 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-202ENST00000463440 SLC34A1Q06495 639 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 GABPB1Q06547 395 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-202ENST00000463440 ST3GAL4Q11206 333 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 EDDM3AQ14507 147 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 GRK1Q15835 563 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 HCP5Q6MZN7 132 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 C17orf107Q6ZR85 190 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 FBN3Q75N90 2809 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 RGP1Q92546 391 aaPredicted RBP13.26□□□□□ -0.29
COL1A1-202ENST00000463440 SMIM19Q96E16 107 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 EXOSC4Q9NPD3 245 aaKnown RBP13.26□□□□□ -0.29
COL1A1-202ENST00000463440 CLEC2DQ9UHP7 191 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 GSTK1Q9Y2Q3 226 aa13.26□□□□□ -0.29
COL1A1-202ENST00000463440 hADV38S2A0JD32 116 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 POM121CA8CG34 1229 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 ZNF728P0DKX0 622 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 RNF144BQ7Z419 303 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 STX19Q8N4C7 294 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 C11orf42Q8N5U0 333 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 OR52N4Q8NGI2 321 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 OR4F5Q8NH21 305 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 FBLIM1Q8WUP2 373 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 TMEM106AQ96A25 262 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 GPER1Q99527 375 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 ZNF747Q9BV97 191 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 CHST6Q9GZX3 395 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 PLCXD1Q9NUJ7 323 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 ZNF281Q9Y2X9 895 aa13.25□□□□□ -0.29
COL1A1-202ENST00000463440 A0A1B0GUS0 222 aa13.24□□□□□ -0.29
COL1A1-202ENST00000463440 C17orf98A8MV24 154 aa13.24□□□□□ -0.29
COL1A1-202ENST00000463440 SIRPB1O00241 398 aa13.24□□□□□ -0.29
COL1A1-202ENST00000463440 MGST3O14880 152 aa13.24□□□□□ -0.29
COL1A1-202ENST00000463440 XPNPEP2O43895 674 aa13.24□□□□□ -0.29
COL1A1-202ENST00000463440 GPR137BO60478 399 aa13.24□□□□□ -0.29
COL1A1-202ENST00000463440 PSPNO60542 156 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms