RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 HDGFL3Q9Y3E1 203 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 FAM215AQ9Y5M1 114 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 SPIN1Q9Y657 262 aaPredicted RBP4.26□□□□□ -1.73
SF3A3-202ENST00000460925 HSPE1-MOB4S4R3N1 261 aa4.26□□□□□ -1.73
SF3A3-202ENST00000460925 POLEQ07864 2286 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 IGKV1D-43A0A0B4J1Z2 117 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 TRGV8A0A0C4DH27 118 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 IGHV4-28A0A0C4DH34 117 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ARRDC5A6NEK1 342 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 FBLL1A6NHQ2 334 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 SLC22A20A6NK97 555 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 TRAF3IP2O43734 574 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 RAMP3O60896 148 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 TOXO94900 526 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 SYNGR4O95473 234 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ACTL6AO96019 429 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 CYB5R3P00387 301 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ACSM4P0C7M7 580 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 HIST1H1CP16403 213 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 GZMHP20718 246 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 EEF1B2P24534 225 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 OTX1P32242 354 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 RPL4P36578 427 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 SRP9P49458 86 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 FOXG1P55316 489 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 SNU13P55769 128 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 CLDN17P56750 224 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 RPS4XP62701 263 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 FMODQ06828 376 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 GK3PQ14409 553 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 RBMS2Q15434 407 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 TRAM1Q15629 374 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 MPPED2Q15777 294 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 PSG3Q16557 428 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 PGGHGQ32M88 737 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 RNF212Q495C1 297 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 Q5BKY6 102 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 MESTQ5EB52 335 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 PABPC1L2AQ5JQF8 200 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 C6orf52Q5T4I8 152 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 SYT6Q5T7P8 510 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 C9orf135Q5VTT2 229 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 LPCAT3Q6P1A2 487 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 KCTD18Q6PI47 426 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ATRAIDQ6UW56 229 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 CASP12Q6UXS9 341 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 RASSF6Q6ZTQ3 369 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF767PQ75MW2 155 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 NUFIP2Q7Z417 695 aaKnown RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 LUZP2Q86TE4 346 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 DOLPP1Q86YN1 238 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 SPAG16Q8N0X2 631 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 LRRC75AQ8NAA5 344 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ST6GALNAC3Q8NDV1 305 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 SDR9C7Q8NEX9 313 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 OR4D6Q8NGJ1 314 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 OR52B4Q8NGK2 314 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 RNF128Q8TEB7 428 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 CYGBQ8WWM9 190 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ASB5Q8WWX0 329 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 DDB2Q92466 427 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 NSMAFQ92636 917 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 WBP1Q96G27 269 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 Q96M85 177 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 TSSK2Q96PF2 358 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ERMAPQ96PL5 475 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ALKBH3Q96Q83 286 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 TSPAN32Q96QS1 320 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF184Q99676 751 aaPredicted RBP4.25□□□□□ -1.73
SF3A3-202ENST00000460925 MND1Q9BWT6 205 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 TSSK6Q9BXA6 273 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 PRRG4Q9BZD6 226 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 CALHM2Q9HA72 323 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 HAO2Q9NYQ3 351 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 USE1Q9NZ43 259 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 OR52A1Q9UKL2 312 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 SLC22A13Q9Y226 551 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 ZNF835Q9Y2P0 537 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 PAM16Q9Y3D7 125 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 IER3IP1Q9Y5U9 82 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 CDH10Q9Y6N8 788 aa4.25□□□□□ -1.73
SF3A3-202ENST00000460925 HCFC1P51610 2035 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 FAM208BQ5VWN6 2430 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 RTTNQ86VV8 2226 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 NBPF19A0A087WUL8 3843 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 IGLV5-39A0A0G2JS06 123 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 OOEPA6NGQ2 149 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 FAM183AA6NL82 134 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 GJE1A6NN92 205 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 DCTN6O00399 190 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 BHLHE40O14503 412 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 BCKDKO14874 412 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 TIMM23O14925 209 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 ST8SIA3O43173 380 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 OR2T1O43869 369 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 NDUFB2O95178 105 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 IGF2P01344 180 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 GYPBP06028 91 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 TSPAN19P0C672 248 aa4.24□□□□□ -1.73
SF3A3-202ENST00000460925 VPREB1P12018 145 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms