RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 LYPD6Q86Y78 171 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 ZNF561Q8N587 486 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 Q8NFD4 153 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 GAFA1Q96PS6 74 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 MDFIQ99750 246 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 ING4Q9UNL4 249 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 GSTK1Q9Y2Q3 226 aa18.68■□□□□ 0.58
C9orf3-209ENST00000460573 TRAV1-2A0A0B4J238 106 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 DVL1O14640 695 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 ECDO95905 644 aaPredicted RBP18.67■□□□□ 0.58
C9orf3-209ENST00000460573 SFTPBP07988 381 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 CD36P16671 472 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 PRKACAP17612 351 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 HNF1AP20823 631 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 ZFP36P26651 326 aaKnown RBP18.67■□□□□ 0.58
C9orf3-209ENST00000460573 LCN2P80188 198 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 TIMM50Q3ZCQ8 353 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 C1QL2Q7Z5L3 287 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 CNTD2Q9H8S5 307 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 ELL3Q9HB65 397 aaPredicted RBP18.67■□□□□ 0.58
C9orf3-209ENST00000460573 LPAR2Q9HBW0 351 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 GHRLQ9UBU3 117 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 OR14J1Q9UGF5 321 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 OR5V1Q9UGF6 321 aa18.67■□□□□ 0.58
C9orf3-209ENST00000460573 MRPS28Q9Y2Q9 187 aaKnown RBP18.67■□□□□ 0.58
C9orf3-209ENST00000460573 RNF212BA8MTL3 300 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 PDCD5O14737 125 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 CSTBP04080 98 aaKnown RBP18.66■□□□□ 0.58
C9orf3-209ENST00000460573 CHRM2P08172 466 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 MYL9P24844 172 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 FGF12P61328 243 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 CD177Q8N6Q3 437 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 FAM216BQ8N7L0 139 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 EXOSC4Q9NPD3 245 aaKnown RBP18.66■□□□□ 0.58
C9orf3-209ENST00000460573 HIF1ANQ9NWT6 349 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 TMEM160Q9NX00 188 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 TXNL4BQ9NX01 149 aaKnown RBP18.66■□□□□ 0.58
C9orf3-209ENST00000460573 MAB21L2Q9Y586 359 aa18.66■□□□□ 0.58
C9orf3-209ENST00000460573 PHF1O43189 567 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-209ENST00000460573 FAM157CP0CG43 387 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 SMIM18P0DKX4 95 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 CAV3P56539 151 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 IKZF1Q13422 519 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 C1orf100Q5SVJ3 147 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 C22orf42Q6IC83 251 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 GLIPR1L1Q6UWM5 242 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 GDPGP1Q6ZNW5 385 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 OR51T1Q8NGJ9 327 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 TBC1D15Q8TC07 691 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 FAM234AQ9H0X4 552 aa18.65■□□□□ 0.58
C9orf3-209ENST00000460573 SLC25A10Q9UBX3 287 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-209ENST00000460573 LOC105371242A0A075B767 164 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 A0A0G2JMP0 313 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 A0A0X1KG70 313 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 SH2D1BO14796 132 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 CDRT1O95170 752 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 HTR3BO95264 441 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 HAND1O96004 215 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 UBBP0CG47 229 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 AWAT2Q6E213 333 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 ZNRF1Q8ND25 227 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 OR4M2Q8NGB6 313 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 OR4D6Q8NGJ1 314 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 ST8SIA4Q92187 359 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 DMRTB1Q96MA1 342 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 NKX3-1Q99801 234 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-209ENST00000460573 OR51E2Q9H255 320 aa18.64■□□□□ 0.57
C9orf3-209ENST00000460573 J3QLI3 93 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 CAPZA1P52907 286 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 IL13RA2Q14627 380 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 DGUOKQ16854 277 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 NHLRC3Q5JS37 347 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 DCAF12L2Q5VW00 463 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 OSR2Q8N2R0 312 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 TMEM185AQ8NFB2 350 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 OR6M1Q8NGM8 313 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 RAB40AQ8WXH6 277 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 YIPF6Q96EC8 236 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 MRPS24Q96EL2 167 aaKnown RBP18.63■□□□□ 0.57
C9orf3-209ENST00000460573 IL36RNQ9UBH0 155 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 AK6Q9Y3D8 172 aaKnown RBP18.63■□□□□ 0.57
C9orf3-209ENST00000460573 V9GY05 133 aa18.63■□□□□ 0.57
C9orf3-209ENST00000460573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.62■□□□□ 0.571e-10■■□□□ 12
C9orf3-209ENST00000460573 A0A1B0GW55 424 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 ENSAO43768 121 aaKnown RBP18.62■□□□□ 0.57
C9orf3-209ENST00000460573 TFF1P04155 84 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 LIPFP07098 398 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 DUX4L2P0CJ85 424 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 DUX4L3P0CJ86 424 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 DUX4L4P0CJ87 422 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 DUX4L5P0CJ88 424 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 DUX4L6P0CJ89 424 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 DUX4L7P0CJ90 424 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 GTF2F2P13984 249 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 SRD5A1P18405 259 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 GADD45AP24522 165 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 HTR2CP28335 458 aa18.62■□□□□ 0.57
C9orf3-209ENST00000460573 RPL5P46777 297 aaKnown RBP18.62■□□□□ 0.57
C9orf3-209ENST00000460573 CEBPDP49716 269 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-209ENST00000460573 COL10A1Q03692 680 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms