RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 A0A1W2PRD5 423 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 A0A1W2PRF3 423 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 A0A1W2PRM7 423 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 POM121CA8CG34 1229 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 ANKRD65E5RJM6 399 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 HAND1O96004 215 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 PAHP00439 452 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 CAPGP40121 348 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 ZNF146Q15072 292 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 MIDNQ504T8 468 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 C8orf59Q8N0T1 100 aaPredicted RBP18.8■□□□□ 0.6
PTPN4-208ENST00000460289 OR8H2Q8N162 312 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 ZSCAN4Q8NAM6 433 aaPredicted RBP18.8■□□□□ 0.6
PTPN4-208ENST00000460289 DYRK2Q92630 601 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 ZNF747Q9BV97 191 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 VCXQ9H320 206 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 DCLRE1BQ9H816 532 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 BABAM2Q9NXR7 383 aa18.8■□□□□ 0.6
PTPN4-208ENST00000460289 SULT1B1O43704 296 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 IGHV4-59P01825 116 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 HCKP08631 526 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 PRKACAP17612 351 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 SAA4P35542 130 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 EDDM3BP56851 147 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 SAXO1Q8IYX7 474 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 PPP1R35Q8TAP8 253 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 GPR148Q8TDV2 347 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 RFT1Q96AA3 541 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 CPNE2Q96FN4 548 aaPredicted RBP18.79■□□□□ 0.6
PTPN4-208ENST00000460289 SPACA5Q96QH8 159 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 HMG20AQ9NP66 347 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 ZNRD1Q9P1U0 126 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 PCDHGB5Q9Y5G0 923 aa18.79■□□□□ 0.6
PTPN4-208ENST00000460289 BTBD17A6NE02 478 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 SH2D1BO14796 132 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 MAGEB3O15480 346 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 ANGPTL7O43827 346 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 KDM4BO94953 1096 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 CD2P06729 351 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 PIPP12273 146 aaPredicted RBP18.78■□□□□ 0.6
PTPN4-208ENST00000460289 GABRR1P24046 479 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 ERVFRD-1P60508 538 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 MEF2CQ06413 473 aaPredicted RBP18.78■□□□□ 0.6
PTPN4-208ENST00000460289 CDK5R1Q15078 307 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 KISS1Q15726 138 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 OR2G6Q5TZ20 316 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 PNKDQ8N490 385 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 C11orf42Q8N5U0 333 aa18.78■□□□□ 0.6
PTPN4-208ENST00000460289 A0A1B0GUS0 222 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 TMEM82A0PJX8 343 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 CCL3L1P16619 93 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 RAB3AP20336 220 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 ZNF273Q14593 569 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 HCP5Q6MZN7 132 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 SHISA2Q6UWI4 295 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 C17orf107Q6ZR85 190 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 OR5D18Q8NGL1 313 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 GGHQ92820 318 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 IL36RNQ9UBH0 155 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 MMP24Q9Y5R2 645 aa18.77■□□□□ 0.6
PTPN4-208ENST00000460289 IGKV1-12A0A0C4DH73 117 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 hADV38S2A0JD32 116 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 EFCAB10A6NFE3 127 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 C17orf98A8MV24 154 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 OGG1O15527 345 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 IGKV1D-12P01611 117 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 RBP4P02753 201 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 ZNF728P0DKX0 622 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 TMEM225BP0DP42 221 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 CALCBP10092 127 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 OMGP23515 440 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 DUSP1P28562 367 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 ST3GAL4Q11206 333 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 GRK1Q15835 563 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 XAF1Q6GPH4 301 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 GDPGP1Q6ZNW5 385 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 OR52N4Q8NGI2 321 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 OR4F5Q8NH21 305 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 OR52N1Q8NH53 320 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 SGMS2Q8NHU3 365 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 RPS4Y2Q8TD47 263 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 TAF15Q92804 592 aaKnown RBP eCLIP18.76■□□□□ 0.59
PTPN4-208ENST00000460289 BEX1Q9HBH7 125 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 EXOSC4Q9NPD3 245 aaKnown RBP18.76■□□□□ 0.59
PTPN4-208ENST00000460289 CNOT2Q9NZN8 540 aaKnown RBP18.76■□□□□ 0.59
PTPN4-208ENST00000460289 GSTK1Q9Y2Q3 226 aa18.76■□□□□ 0.59
PTPN4-208ENST00000460289 MGST3O14880 152 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 GPR137BO60478 399 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 NDUFA7O95182 113 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 GNAO1P09471 354 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 SOX2P48431 317 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 SNU13P55769 128 aaKnown RBP18.75■□□□□ 0.59
PTPN4-208ENST00000460289 EDDM3AQ14507 147 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 RNF144BQ7Z419 303 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 BEND2Q8NDZ0 799 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 OR5R1Q8NH85 324 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 RGP1Q92546 391 aaPredicted RBP18.75■□□□□ 0.59
PTPN4-208ENST00000460289 SMIM19Q96E16 107 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 C1RLQ9NZP8 487 aa18.75■□□□□ 0.59
PTPN4-208ENST00000460289 CLEC2DQ9UHP7 191 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms