RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 TK1P04183 234 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 CHRM2P08172 466 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 RAB3AP20336 220 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 UBA52P62987 128 aaKnown RBP17.05■□□□□ 0.32
VARS-218ENST00000459667 BDH1Q02338 343 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 BAMBIQ13145 260 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 PDZD9Q8IXQ8 264 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 Q8N7P7 452 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 ZFP41Q8N8Y5 198 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 TMEM106AQ96A25 262 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 CCDC90BQ9GZT6 254 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 DUSP21Q9H596 190 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 TAS2R4Q9NYW5 299 aa17.05■□□□□ 0.32
VARS-218ENST00000459667 IGKV1-12A0A0C4DH73 117 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 DNAJC9-AS1A6NH13 148 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 M0R1W7 72 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
VARS-218ENST00000459667 HAND1O96004 215 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 IGKV1D-12P01611 117 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 PRKACAP17612 351 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 CRHBPP24387 322 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 RPL31P62899 125 aaKnown RBP17.04■□□□□ 0.32
VARS-218ENST00000459667 BLMHQ13867 455 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 KISS1Q15726 138 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 DEFB112Q30KQ8 113 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 ASPHD2Q6ICH7 369 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 CRIP3Q6Q6R5 217 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 OR13C5Q8NGS8 318 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 FAM216AQ8WUB2 273 aa17.04■□□□□ 0.32
VARS-218ENST00000459667 PAK1IP1Q9NWT1 392 aaPredicted RBP17.04■□□□□ 0.32
VARS-218ENST00000459667 PNMA8CA0A1B0GUJ8 204 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 K7N7A8 449 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 ZNF737O75373 536 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 KDM4BO94953 1096 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 CD1AP06126 327 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 CALCBP10092 127 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 CELP19835 753 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 EEF1B2P24534 225 aaKnown RBP17.03■□□□□ 0.32
VARS-218ENST00000459667 SNU13P55769 128 aaKnown RBP17.03■□□□□ 0.32
VARS-218ENST00000459667 ZP1P60852 638 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 PPP3R1P63098 170 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 ACTG1P63261 375 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 ACSM1Q08AH1 577 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 SPHARQ15513 63 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 SPIN3Q5JUX0 258 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 ZNF529Q6P280 563 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 METAP1DQ6UB28 335 aaPredicted RBP17.03■□□□□ 0.32
VARS-218ENST00000459667 C1orf122Q6ZSJ8 110 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 SAXO1Q8IYX7 474 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 OR4M1Q8NGD0 313 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 OR51A2Q8NGJ7 313 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 THRSPQ92748 146 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 PGLYRP3Q96LB9 341 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 C1orf147Q96MC9 270 aaPredicted RBP17.03■□□□□ 0.32
VARS-218ENST00000459667 DUX5Q96PT3 197 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 METTL8Q9H825 291 aaKnown RBP17.03■□□□□ 0.32
VARS-218ENST00000459667 ZMAT3Q9HA38 289 aaKnown RBP17.03■□□□□ 0.32
VARS-218ENST00000459667 HMG20AQ9NP66 347 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 CKLFQ9UBR5 152 aa17.03■□□□□ 0.32
VARS-218ENST00000459667 A0A1W2PPH5 198 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 TMEM225BP0DP42 221 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 PRTN3P24158 256 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 DUSP1P28562 367 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 DLX1P56177 255 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 PRB3Q04118 309 aaPredicted RBP17.02■□□□□ 0.32
VARS-218ENST00000459667 ZNF146Q15072 292 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 MED22Q15528 200 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 Q499Y3 187 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 PRSS48Q7RTY5 328 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 ZSCAN4Q8NAM6 433 aaPredicted RBP17.02■□□□□ 0.32
VARS-218ENST00000459667 ZDHHC16Q969W1 377 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 GPER1Q99527 375 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 SEBOXQ9HB31 216 aaPredicted RBP17.02■□□□□ 0.32
VARS-218ENST00000459667 GLS2Q9UI32 602 aa17.02■□□□□ 0.32
VARS-218ENST00000459667 TRBV5-5A0A0J9YX44 114 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 RNASEK-C17orf49H0YIS7 233 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 DENRO43583 198 aaKnown RBP17.01■□□□□ 0.31
VARS-218ENST00000459667 GUCA2AQ02747 115 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 KLRD1Q13241 179 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 TMEM200BQ69YZ2 307 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 GDPD3Q7L5L3 318 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 SATL1Q86VE3 508 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 OR8H2Q8N162 312 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 TBC1D15Q8TC07 691 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 SGCDQ92629 289 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 SNX22Q96L94 193 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 PRDM13Q9H4Q3 707 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 UNKLQ9H9P5 680 aaKnown RBP17.01■□□□□ 0.31
VARS-218ENST00000459667 RHOFQ9HBH0 211 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 GSTK1Q9Y2Q3 226 aa17.01■□□□□ 0.31
VARS-218ENST00000459667 TMEM82A0PJX8 343 aa17■□□□□ 0.31
VARS-218ENST00000459667 GABRPO00591 440 aa17■□□□□ 0.31
VARS-218ENST00000459667 GABRR1P24046 479 aa17■□□□□ 0.31
VARS-218ENST00000459667 MAPK3P27361 379 aaPredicted RBP17■□□□□ 0.31
VARS-218ENST00000459667 EDDM3BP56851 147 aa17■□□□□ 0.31
VARS-218ENST00000459667 RPS11P62280 158 aaKnown RBP eCLIP17■□□□□ 0.31
VARS-218ENST00000459667 DOC2BQ14184 412 aa17■□□□□ 0.31
VARS-218ENST00000459667 ZNF273Q14593 569 aa17■□□□□ 0.31
VARS-218ENST00000459667 IRF3Q14653 427 aa17■□□□□ 0.31
VARS-218ENST00000459667 SLC9A3R2Q15599 337 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms