RNA–Protein interactions for RNA: ENST00000457863.1

HMGB3P30-201, Transcript of high mobility group box 3 pseudogene 30, humanhuman

BASIC

Gene HMGB3P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P30-201ENST00000457863 GPR6P46095 362 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 LGALS7P47929 136 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 TPI1P60174 286 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 HSPE1P61604 102 aaKnown RBP3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 TBPL1P62380 186 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 SLC35A2P78381 396 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 CDK5Q00535 292 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 EMX1Q04741 257 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 MXD1Q05195 221 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 FHL1Q13642 323 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 PMVKQ15126 192 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 GRK1Q15835 563 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 KLF17Q5JT82 389 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 FAM219BQ5XKK7 198 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 TBPL2Q6SJ96 375 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 CALHM3Q86XJ0 350 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 UBALD2Q8IYN6 164 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 SAMD12Q8N8I0 201 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR51S1Q8NGJ8 323 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 OR4C3Q8NH37 302 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 NEIL3Q8TAT5 605 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNRF4Q8WWF5 429 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 TMEM230Q96A57 120 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 DCUN1D1Q96GG9 259 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 LINC00477Q96M19 166 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 BIRC8Q96P09 236 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 PLEKHF1Q96S99 279 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 RHNO1Q9BSD3 238 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 FAAP24Q9BTP7 215 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 C1orf50Q9BV19 199 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 RIOK2Q9BVS4 552 aaKnown RBP3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 MND1Q9BWT6 205 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 MROQ9BYG7 248 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 KRTAP2-2Q9BYT5 123 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 MAP1LC3BQ9GZQ8 125 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 RNF167Q9H6Y7 350 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 PLAC1Q9HBJ0 212 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 PLSCR3Q9NRY6 295 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 COPZ2Q9P299 210 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 ZNF223Q9UK11 482 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 ST3GAL6Q9Y274 331 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 WSB1Q9Y6I7 421 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 BCL9O00512 1426 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 FGD6Q6ZV73 1430 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 PTPRJQ12913 1337 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 RAPGEF2Q9Y4G8 1499 aa3.16□□□□□ -1.9
HMGB3P30-201ENST00000457863 CHD2O14647 1828 aaKnown RBP3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 TRAV8-4A0A0B4J246 113 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 A0A1W2PRE2 83 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 ARL5CA6NH57 179 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 OR5H1A6NKK0 313 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 D6RAR5 112 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 E9PLD3 99 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 H7C1H1 209 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 SOCS2O14508 198 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 TPST1O60507 370 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 FRAT2O75474 233 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 GCM2O75603 506 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 POP7O75817 140 aaKnown RBP3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 SEMA4FO95754 770 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 MOSP00540 346 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 IGF2P01344 180 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 P01737 135 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 IGHV3-9P01782 118 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 REG1AP05451 166 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 PFN1P07737 140 aaKnown RBP3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 IL3P08700 152 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 RBMY1CP0DJD4 496 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 RCC1P18754 421 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 ATF1P18846 271 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 TCN2P20062 427 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 MAP2K4P45985 399 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 CSRP3P50461 194 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 MTPNP58546 118 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 EMX2Q04743 252 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 PUDPQ08623 228 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 GAGE5Q13069 117 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 GAGE6Q13070 117 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 FASTKQ14296 549 aaKnown RBP3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 TWIST1Q15672 202 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 C1orf194Q5T5A4 169 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 ZNF684Q5T5D7 378 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 NANOGP8Q6NSW7 305 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 ALKAL1Q6UXT8 129 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 NEGR1Q7Z3B1 354 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 DOLPP1Q86YN1 238 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 OSR2Q8N2R0 312 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 ZNF843Q8N446 348 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 CBR4Q8N4T8 237 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 NPWQ8N729 165 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 ZFP41Q8N8Y5 198 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 ZNF114Q8NC26 417 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 OR52L1Q8NGH7 329 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 OR51A2Q8NGJ7 313 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 OR10G7Q8NGN6 311 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 OR2K2Q8NGT1 345 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 MFSD8Q8NHS3 518 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 CYGBQ8WWM9 190 aa3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 SRSF12Q8WXF0 261 aaKnown RBP3.15□□□□□ -1.91
HMGB3P30-201ENST00000457863 C14orf144Q96I85 54 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms