RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 ZNF488Q96MN9 340 aa12.17□□□□□ -0.46
VPS16-205ENST00000453689 GFI1Q99684 422 aa12.17□□□□□ -0.46
VPS16-205ENST00000453689 RNF167Q9H6Y7 350 aa12.17□□□□□ -0.46
VPS16-205ENST00000453689 CNTD2Q9H8S5 307 aa12.17□□□□□ -0.46
VPS16-205ENST00000453689 SMURF1Q9HCE7 757 aa12.17□□□□□ -0.46
VPS16-205ENST00000453689 MTCH1Q9NZJ7 389 aa12.17□□□□□ -0.46
VPS16-205ENST00000453689 KAAG1Q9UBP8 84 aa12.17□□□□□ -0.46
VPS16-205ENST00000453689 AK6Q9Y3D8 172 aaKnown RBP12.17□□□□□ -0.46
VPS16-205ENST00000453689 MXRA5Q9NR99 2828 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 IGHV2-70DA0A0C4DH43 119 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 IGKV1-12A0A0C4DH73 117 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 A0A1B0GW55 424 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 TMPRSS2O15393 492 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 KDM4BO94953 1096 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 NXPH2O95156 264 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 IGKV1D-12P01611 117 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DUX4L2P0CJ85 424 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DUX4L3P0CJ86 424 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DUX4L4P0CJ87 422 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DUX4L5P0CJ88 424 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DUX4L6P0CJ89 424 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DUX4L7P0CJ90 424 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 CD37P11049 281 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 RAB3BP20337 219 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 ERVK11-1P61568 191 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 LSM3P62310 102 aaKnown RBP12.16□□□□□ -0.46
VPS16-205ENST00000453689 C1orf100Q5SVJ3 147 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 STUMQ69YW2 141 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DUX4L9Q6RFH8 374 aaPredicted RBP12.16□□□□□ -0.46
VPS16-205ENST00000453689 TPRA1Q86W33 373 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 CLVS1Q8IUQ0 354 aaPredicted RBP12.16□□□□□ -0.46
VPS16-205ENST00000453689 TEX29Q8N6K0 151 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 OR5T2Q8NGG2 359 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 OR4D6Q8NGJ1 314 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 OR6M1Q8NGM8 313 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 RAB40AQ8WXH6 277 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 C12orf43Q96C57 262 aaKnown RBP12.16□□□□□ -0.46
VPS16-205ENST00000453689 CCL13Q99616 98 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 NAA50Q9GZZ1 169 aaKnown RBP12.16□□□□□ -0.46
VPS16-205ENST00000453689 RHOFQ9HBH0 211 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 HES4Q9HCC6 221 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 RASL12Q9NYN1 266 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DNAJB11Q9UBS4 358 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 DUX4Q9UBX2 424 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 METRNQ9UJH8 293 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 MRPS28Q9Y2Q9 187 aaKnown RBP12.16□□□□□ -0.46
VPS16-205ENST00000453689 V9GY05 133 aa12.16□□□□□ -0.46
VPS16-205ENST00000453689 C22orf46C9J442 243 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 SLC17A2O00624 439 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 SLC22A1O15245 554 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 FSHBP01225 129 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 TFF1P04155 84 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 AMY2BP19961 511 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 BCL3P20749 454 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 SDC2P34741 201 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 RANBP1P43487 201 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 OR10A3P58181 314 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 PAX8Q06710 450 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 SMIM21Q3B7S5 101 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 AWAT2Q6E213 333 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 ASCL4Q6XD76 172 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 ACP7Q6ZNF0 438 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 BATF2Q8N1L9 274 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 NANPQ8TBE9 248 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 EMG1Q92979 244 aaKnown RBP12.15□□□□□ -0.46
VPS16-205ENST00000453689 S100A13Q99584 98 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 NUDT16L1Q9BRJ7 211 aaKnown RBP12.15□□□□□ -0.46
VPS16-205ENST00000453689 MRI1Q9BV20 369 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 METTL9Q9H1A3 318 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 ELL3Q9HB65 397 aaPredicted RBP12.15□□□□□ -0.46
VPS16-205ENST00000453689 PLGRKTQ9HBL7 147 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 IL36GQ9NZH8 169 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 NLKQ9UBE8 527 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 GHRLQ9UBU3 117 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 AUP1Q9Y679 476 aa12.15□□□□□ -0.46
VPS16-205ENST00000453689 KIR2DS1A0A191URI9 304 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 DVL1O14640 695 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 NOL3O60936 208 aaKnown RBP12.14□□□□□ -0.47
VPS16-205ENST00000453689 CDRT1O95170 752 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 UBBP0CG47 229 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 CFPP27918 469 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 HTR2CP28335 458 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 TGFBR1P36897 503 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 NPBWR2P48146 333 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 BMXP51813 675 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 VBP1P61758 197 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 NCS1P62166 190 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 BLMHQ13867 455 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 RSU1Q15404 277 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 CTF1Q16619 201 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 ATPAF1Q5TC12 328 aaPredicted RBP12.14□□□□□ -0.47
VPS16-205ENST00000453689 GLIPR1L1Q6UWM5 242 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 BTNL3Q6UXE8 466 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 SLC36A1Q7Z2H8 476 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 FGFRL1Q8N441 504 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 FAM216BQ8N7L0 139 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 TBC1D15Q8TC07 691 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 RAB2BQ8WUD1 216 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 BCL7BQ9BQE9 202 aa12.14□□□□□ -0.47
VPS16-205ENST00000453689 DNTTIP1Q9H147 329 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms