RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 FADS6Q8N9I5 356 aa13.67□□□□□ -0.22
TRA2B-205ENST00000453386 KDF1Q8NAX2 398 aaPredicted RBP13.67□□□□□ -0.22
TRA2B-205ENST00000453386 SUMF2Q8NBJ7 301 aa13.67□□□□□ -0.22
TRA2B-205ENST00000453386 SUMF1Q8NBK3 374 aa13.67□□□□□ -0.22
TRA2B-205ENST00000453386 OR10AD1Q8NGE0 317 aa13.67□□□□□ -0.22
TRA2B-205ENST00000453386 TCTEX1D2Q8WW35 142 aa13.67□□□□□ -0.22
TRA2B-205ENST00000453386 TMEM54Q969K7 222 aa13.67□□□□□ -0.22
TRA2B-205ENST00000453386 MSI2Q96DH6 328 aaKnown RBP13.67□□□□□ -0.22
TRA2B-205ENST00000453386 CHRDQ9H2X0 955 aa13.67□□□□□ -0.22
TRA2B-205ENST00000453386 AKIRIN1Q9H9L7 192 aaPredicted RBP13.67□□□□□ -0.22
TRA2B-205ENST00000453386 RARRES3Q9UL19 164 aa13.67□□□□□ -0.22
TRA2B-205ENST00000453386 CHCHD2Q9Y6H1 151 aaPredicted RBP13.67□□□□□ -0.22
TRA2B-205ENST00000453386 HERV-K104P61576 105 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 H3F3AP84243 136 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 BATF2Q8N1L9 274 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 SLC39A7Q92504 469 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 SPSB2Q99619 263 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 FAM24AA6NFZ4 105 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 FKBP2P26885 142 aaKnown RBP13.66□□□□□ -0.22
TRA2B-205ENST00000453386 FAM209BQ5JX69 171 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 NCMAPQ5T1S8 102 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 SLC35G3Q8N808 338 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 HPSE2Q8WWQ2 592 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 ZNF286AQ9HBT8 521 aa13.66□□□□□ -0.22
TRA2B-205ENST00000453386 AP4M1O00189 453 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 CLN5O75503 358 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 OR2C1O95371 312 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 IGHV2-5P01817 119 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 CELA2AP08217 269 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 CD63P08962 238 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 PATE4P0C8F1 98 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 LBX1P52954 281 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 CNN3Q15417 329 aaKnown RBP13.65□□□□□ -0.22
TRA2B-205ENST00000453386 ZNF774Q6NX45 483 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 MAML2Q8IZL2 1156 aaPredicted RBP13.65□□□□□ -0.22
TRA2B-205ENST00000453386 LRTM2Q8N967 370 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 AKR7LQ8NHP1 331 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 C19orf25Q9UFG5 118 aaPredicted RBP13.65□□□□□ -0.22
TRA2B-205ENST00000453386 ST3GAL6Q9Y274 331 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 CDRT15L2A8MXV6 281 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 EIF1BO60739 113 aaKnown RBP13.65□□□□□ -0.22
TRA2B-205ENST00000453386 PMELP40967 661 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 EIF2S3P41091 472 aaKnown RBP13.65□□□□□ -0.22
TRA2B-205ENST00000453386 HIST1H3AP68431 136 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 CCL20P78556 96 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 EWSR1Q01844 656 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRA2B-205ENST00000453386 HIST2H3PS2Q5TEC6 136 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 HIST2H3AQ71DI3 136 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 ZFP62Q8NB50 900 aaPredicted RBP13.65□□□□□ -0.22
TRA2B-205ENST00000453386 OR2G3Q8NGZ4 309 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 TP53RKQ96S44 253 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 ANGPTL4Q9BY76 406 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 IFNA17P01571 189 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 RPS10P46783 165 aaKnown RBP13.65□□□□□ -0.22
TRA2B-205ENST00000453386 TMEM123Q8N131 208 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 OSR2Q8N2R0 312 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 ABHD14AQ9BUJ0 271 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 BCO1Q9HAY6 547 aa13.65□□□□□ -0.22
TRA2B-205ENST00000453386 IGKV1-12A0A0C4DH73 117 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 BCAT2O15382 392 aaPredicted RBP13.64□□□□□ -0.23
TRA2B-205ENST00000453386 ONECUT2O95948 504 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 IGKV1D-12P01611 117 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 AADACP22760 399 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 POLR2GP62487 172 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRA2B-205ENST00000453386 LFNGQ8NES3 379 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 ZNF700Q9H0M5 742 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 OR51M1Q9H341 326 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 ZNF442Q9H7R0 627 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 NKX2-6A6NCS4 301 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 NRASP01111 189 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 AFF3P51826 1226 aaKnown RBP13.64□□□□□ -0.23
TRA2B-205ENST00000453386 RPS23P62266 143 aaKnown RBP13.64□□□□□ -0.23
TRA2B-205ENST00000453386 IGSF11Q5DX21 431 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 OR2C3Q8N628 320 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 CCDC71LQ8N9Z2 235 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 MOB3AQ96BX8 217 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 MAGT1Q9H0U3 335 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 TMED3Q9Y3Q3 217 aa13.64□□□□□ -0.23
TRA2B-205ENST00000453386 K7N7A8 449 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 TNFSF11O14788 317 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 VAMP5O95183 116 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 S100PP25815 95 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 RAB1AP62820 205 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 FAM27BQ5VT28 67 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 Q6ZSR3 168 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 CCDC54Q8NEL0 328 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 BOD1Q96IK1 185 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 MMP24Q9Y5R2 645 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 CCDC163A0A0D9SF12 145 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 SLC33A1O00400 549 aaPredicted RBP13.63□□□□□ -0.23
TRA2B-205ENST00000453386 ATP6V0CP27449 155 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 MALLQ13021 153 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 SPIN3Q5JUX0 258 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 FOXL2NBQ6ZUU3 175 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 DKKL1Q9UK85 242 aa13.63□□□□□ -0.23
TRA2B-205ENST00000453386 C3orf85A0A1B0GTC6 90 aa13.62□□□□□ -0.23
TRA2B-205ENST00000453386 ZNF727A8MUV8 499 aa13.62□□□□□ -0.23
TRA2B-205ENST00000453386 OR7C1O76099 320 aaPredicted RBP13.62□□□□□ -0.23
TRA2B-205ENST00000453386 DKK1O94907 266 aa13.62□□□□□ -0.23
TRA2B-205ENST00000453386 ACER2Q5QJU3 275 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms