RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 M0R135 149 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 IFNA6P05013 189 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 GNAO1P09471 354 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 SLC2A5P22732 501 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 CD24P25063 80 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 HTR1FP30939 366 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 FMO3P31513 532 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 ISL1P61371 349 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 ACTC1P68032 377 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 ACTA1P68133 377 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 MINOS1Q5TGZ0 78 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 AADACL4Q5VUY2 407 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 LCNL1Q6ZST4 164 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 CALHM1Q8IU99 346 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 EGFL6Q8IUX8 553 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 CPOQ8IVL8 374 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 COMMD1Q8N668 190 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 OR4M1Q8NGD0 313 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 OR2T27Q8NH04 317 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 NDNFQ8TB73 568 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 SPTSSAQ969W0 71 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 ZNF799Q96GE5 643 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 RBM14Q96PK6 669 aaKnown RBP9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 NUAK2Q9H093 628 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 B9D1Q9UPM9 204 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 TPRKBQ9Y3C4 175 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 RPL36Q9Y3U8 105 aaKnown RBP9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 SNX5Q9Y5X3 404 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 TMEM14AQ9Y6G1 99 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 MINOS1-NBL1R4GNA1 71 aa9.9□□□□□ -0.82
AC004540.1-204ENST00000449537 IGKV1D-17A0A075B6S4 117 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 C17orf98A8MV24 154 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 OR2F2O95006 317 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 PSG2P11465 335 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 PIPP12273 146 aaPredicted RBP9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 BRS3P32247 399 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 RPS7P62081 194 aaKnown RBP9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 KIR2DS1Q14954 304 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 DEFB136Q30KP8 78 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 TEX30Q5JUR7 227 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 SLC18B1Q6NT16 456 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 LINC00346Q8IVM7 164 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 OR6V1Q8N148 313 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 ZNF454Q8N9F8 522 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 OR6K6Q8NGW6 343 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 RPL3LQ92901 407 aaKnown RBP9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 MRPL48Q96GC5 212 aaKnown RBP9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 CNN2Q99439 309 aaKnown RBP9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 SPATA25Q9BR10 227 aa9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 CNOT2Q9NZN8 540 aaKnown RBP9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 SIRT4Q9Y6E7 314 aaPredicted RBP9.89□□□□□ -0.83
AC004540.1-204ENST00000449537 M0QZK8 103 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 MRPS14O60783 128 aaKnown RBP9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 IGHV1-8P0DP01 117 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 ZNF823P16415 610 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 GLRA1P23415 457 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 GSTT1P30711 240 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 GTF2A1P52655 376 aaPredicted RBP9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 SLC35B1P78383 322 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 RAB40BQ12829 278 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 APOFQ13790 326 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 ZNF273Q14593 569 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 KLHL12Q53G59 568 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 LINC01590Q5TEZ4 76 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 SHFQ7M4L6 423 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 SDSLQ96GA7 329 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 NOL4LQ96MY1 436 aaPredicted RBP9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 INTS14Q96SY0 518 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 MICU1Q9BPX6 476 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 OPA3Q9H6K4 179 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 PNRC2Q9NPJ4 139 aaKnown RBP9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 PLCXD1Q9NUJ7 323 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 NDUFA13Q9P0J0 144 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 N6AMT1Q9Y5N5 214 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 COMMD3-BMI1R4GMX3 469 aa9.88□□□□□ -0.83
AC004540.1-204ENST00000449537 EFCAB10A6NFE3 127 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 FAM183AA6NL82 134 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 SLC1A7O00341 560 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 HLA-DQA2P01906 255 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 DBTP11182 482 aaKnown RBP9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 ATP6V1B1P15313 513 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 RPL5P46777 297 aaKnown RBP9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 ZNF91Q05481 1191 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 C6orf141Q5SZD1 244 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 DRAM2Q6UX65 266 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 ZNF429Q86V71 674 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 SVOPQ8N4V2 548 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 HAVCR2Q8TDQ0 301 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 APH1BQ8WW43 257 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 OTULINQ96BN8 352 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 TSSK2Q96PF2 358 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 TEAD3Q99594 435 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 JAM3Q9BX67 310 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 YIPF3Q9GZM5 350 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 FAM192AQ9GZU8 254 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 OR51V1Q9H2C8 321 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 PPP1R3EQ9H7J1 279 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 SP140LQ9H930 580 aa9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 MRPS18AQ9NVS2 196 aaKnown RBP9.87□□□□□ -0.83
AC004540.1-204ENST00000449537 DNAJC27Q9NZQ0 273 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms