RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 LRRC30A6NM36 301 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 SOCS1O15524 211 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 KNG1P01042 644 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 HPXP02790 462 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 MELTFP08582 738 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 GLRA1P23415 457 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 MRPS10P82664 201 aaKnown RBP16.21■□□□□ 0.19
RPS28-202ENST00000449223 TAF9Q16594 264 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 ZNF260Q3ZCT1 412 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 PLAC9Q5JTB6 97 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 FIP1L1Q6UN15 594 aaKnown RBP16.21■□□□□ 0.19
RPS28-202ENST00000449223 NEU4Q8WWR8 484 aaPredicted RBP16.21■□□□□ 0.19
RPS28-202ENST00000449223 VRK1Q99986 396 aaPredicted RBP16.21■□□□□ 0.19
RPS28-202ENST00000449223 CCDC32Q9BV29 185 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 IL36RNQ9UBH0 155 aa16.21■□□□□ 0.19
RPS28-202ENST00000449223 MFNGO00587 321 aa16.2■□□□□ 0.18
RPS28-202ENST00000449223 FSTL3O95633 263 aa16.2■□□□□ 0.18
RPS28-202ENST00000449223 HIST1H1DP16402 221 aaKnown RBP16.2■□□□□ 0.18
RPS28-202ENST00000449223 CHATP28329 748 aa16.2■□□□□ 0.18
RPS28-202ENST00000449223 C1orf87Q8N0U7 546 aa16.2■□□□□ 0.18
RPS28-202ENST00000449223 BATF2Q8N1L9 274 aa16.2■□□□□ 0.18
RPS28-202ENST00000449223 RAB3CQ96E17 227 aa16.2■□□□□ 0.18
RPS28-202ENST00000449223 WDR13Q9H1Z4 485 aa16.2■□□□□ 0.18
RPS28-202ENST00000449223 AUNIPQ9H7T9 357 aa16.2■□□□□ 0.18
RPS28-202ENST00000449223 TRAV18A0A075B6X5 111 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 IGHV1-69-2A0A0G2JMI3 117 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 WNT9BO14905 357 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 GSTP1P09211 210 aaKnown RBP16.19■□□□□ 0.18
RPS28-202ENST00000449223 IRF2P14316 349 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 EGR1P18146 543 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 GABRR1P24046 479 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 BLVRBP30043 206 aaPredicted RBP16.19■□□□□ 0.18
RPS28-202ENST00000449223 TEX36Q5VZQ5 186 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 IZUMO1Q8IYV9 350 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 SPACA1Q9HBV2 294 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 KCNK7Q9Y2U2 307 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 SERPINE3A8MV23 424 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 TMEM178BH3BS89 294 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 GSTZ1O43708 216 aaPredicted RBP16.19■□□□□ 0.18
RPS28-202ENST00000449223 PDCD6O75340 191 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 CA11O75493 328 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 GLAP06280 429 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 FUT3P21217 361 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 Q6P435 159 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 Q6ZTK2 550 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 DTX3Q8N9I9 347 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 SMIM4Q8WVI0 70 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 ST8SIA4Q92187 359 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 BORCS5Q969J3 196 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 ARHGAP5-AS1Q96IT6 56 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 TMEM106BQ9NUM4 274 aa16.19■□□□□ 0.18
RPS28-202ENST00000449223 MRPS7Q9Y2R9 242 aaKnown RBP16.19■□□□□ 0.18
RPS28-202ENST00000449223 J3QRK9 145 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 OR7C1O76099 320 aaPredicted RBP16.18■□□□□ 0.18
RPS28-202ENST00000449223 MUC1P15941 1255 aaPredicted RBP16.18■□□□□ 0.18
RPS28-202ENST00000449223 LMO1P25800 156 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 PNLIPRP3Q17RR3 467 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 CDNFQ49AH0 187 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 TGIF2LYQ8IUE0 185 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 Q8N402 240 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 CHST4Q8NCG5 386 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 PECRQ9BY49 303 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 SCPEP1Q9HB40 452 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 PALMDQ9NP74 551 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 DLL4Q9NR61 685 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 ZNF581Q9P0T4 197 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 NLKQ9UBE8 527 aa16.18■□□□□ 0.18
RPS28-202ENST00000449223 TACC2O95359 2948 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 GABARAPH6UMI1 98 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 SULT1C2O00338 296 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 RP2O75695 350 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 CYB5R3P00387 301 aaPredicted RBP16.17■□□□□ 0.18
RPS28-202ENST00000449223 SSTR2P30874 369 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 PYDC2Q56P42 97 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 SNX29P2Q8IUI4 249 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 RDH5Q92781 318 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 NEDD4LQ96PU5 975 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 GLS2Q9UI32 602 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 ZNF222Q9UK12 451 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 CACNG2Q9Y698 323 aa16.17■□□□□ 0.18
RPS28-202ENST00000449223 TMEM235A6NFC5 223 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 C3orf80F5H4A9 247 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 SH2D1BO14796 132 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 GNB3P16520 340 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 HOXA4Q00056 320 aaPredicted RBP16.16■□□□□ 0.18
RPS28-202ENST00000449223 IKZF1Q13422 519 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 MADCAM1Q13477 382 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 HFEQ30201 348 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 HACD4Q5VWC8 232 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 C6orf201Q7Z4U5 140 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 GPX8Q8TED1 209 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 ZFAND2BQ8WV99 257 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 CCL17Q92583 94 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 TRIM63Q969Q1 353 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 SEH1LQ96EE3 360 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 PLEKHJ1Q9NW61 149 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 RBMX2Q9Y388 322 aaKnown RBP16.16■□□□□ 0.18
RPS28-202ENST00000449223 WIPI2Q9Y4P8 454 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 CENPEQ02224 2701 aa16.16■□□□□ 0.18
RPS28-202ENST00000449223 CELSR2Q9HCU4 2923 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms