RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 FBXW12Q6X9E4 464 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 TMEM123Q8N131 208 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 ZIC4Q8N9L1 334 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 SUMF1Q8NBK3 374 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 ISOC2Q96AB3 205 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 RGCCQ9H4X1 137 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 UBE2ZQ9H832 354 aaPredicted RBP11.22□□□□□ -0.61
SHC1-210ENST00000448116 TRAPPC6AO75865 159 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 VAMP5O95183 116 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 NRASP01111 189 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 IGLV3-1P01715 115 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 CFIP05156 583 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 FKBP2P26885 142 aaKnown RBP11.22□□□□□ -0.61
SHC1-210ENST00000448116 DVL1P1P54792 670 aaPredicted RBP11.22□□□□□ -0.61
SHC1-210ENST00000448116 NHLH2Q02577 135 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 KRBOX4Q5JUW0 171 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 ZNF468Q5VIY5 522 aaPredicted RBP11.22□□□□□ -0.61
SHC1-210ENST00000448116 RPS19BP1Q86WX3 136 aaKnown RBP11.22□□□□□ -0.61
SHC1-210ENST00000448116 OR14L1PQ8NHC6 308 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 NAA60Q9H7X0 242 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 ST3GAL6Q9Y274 331 aa11.22□□□□□ -0.61
SHC1-210ENST00000448116 BORCS7-ASMTA0A0B4J1R7 106 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 OR7C1O76099 320 aaPredicted RBP11.21□□□□□ -0.61
SHC1-210ENST00000448116 CCL4P13236 92 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 DSCR4P56555 118 aaPredicted RBP11.21□□□□□ -0.61
SHC1-210ENST00000448116 SNRPEP62304 92 aaKnown RBP11.21□□□□□ -0.61
SHC1-210ENST00000448116 MRPL14Q6P1L8 145 aaKnown RBP11.21□□□□□ -0.61
SHC1-210ENST00000448116 OR52M1Q8NGK5 317 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 CD300LFQ8TDQ1 290 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 DUSP23Q9BVJ7 150 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 PARD6GQ9BYG4 376 aaPredicted RBP11.21□□□□□ -0.61
SHC1-210ENST00000448116 SPACA1Q9HBV2 294 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 PARP11Q9NR21 331 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 SMCO4Q9NRQ5 59 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 MIOXQ9UGB7 285 aa11.21□□□□□ -0.61
SHC1-210ENST00000448116 CCDC163A0A0D9SF12 145 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 E5RGE8 158 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 DKK1O94907 266 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 CCNOP22674 350 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 C5orf24Q7Z6I8 188 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 GPR137CQ8N3F9 429 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 OR1F12Q8NHA8 337 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 NSG2Q9Y328 171 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 FBXO7Q9Y3I1 522 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 TRIOBPQ9H2D6 2365 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 CD5P06127 495 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 OMGP23515 440 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 ECI1P42126 302 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 HERV-K104P61576 105 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 CNN3Q15417 329 aaKnown RBP11.21□□□□□ -0.62
SHC1-210ENST00000448116 FAM27BQ5VT28 67 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 PLCXD3Q63HM9 321 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 SSX9Q7RTT3 188 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 OR10AD1Q8NGE0 317 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 EDARADDQ8WWZ3 215 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 SH3BGRL3Q9H299 93 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 PLEKHA2Q9HB19 425 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 WFDC1Q9HC57 220 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 SLC2A9Q9NRM0 540 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 P4HTMQ9NXG6 502 aa11.21□□□□□ -0.62
SHC1-210ENST00000448116 A0A087WZY1 265 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 IGKV1-12A0A0C4DH73 117 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 ARGFXA6NJG6 315 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 CXCL13O43927 109 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 IGKV1D-12P01611 117 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 ZNF16P17020 682 aaPredicted RBP11.2□□□□□ -0.62
SHC1-210ENST00000448116 NTF4P34130 210 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 TMEM187Q14656 261 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 CLINT1Q14677 625 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 ZNF239Q16600 458 aaKnown RBP11.2□□□□□ -0.62
SHC1-210ENST00000448116 SPIN3Q5JUX0 258 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 LYSMD4Q5XG99 296 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 AAED1Q7RTV5 226 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 SPSB1Q96BD6 273 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 GPHA2Q96T91 129 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 OTX1P32242 354 aaPredicted RBP11.2□□□□□ -0.62
SHC1-210ENST00000448116 GLP1RP43220 463 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 CEBPGP53567 150 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 RAB5BP61020 215 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 MRPS34P82930 218 aaKnown RBP11.2□□□□□ -0.62
SHC1-210ENST00000448116 GUK1Q16774 197 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 HLA-BQ31612 363 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 C9orf135Q5VTT2 229 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 OSR2Q8N2R0 312 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 SFT2D1Q8WV19 159 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 IP6K3Q96PC2 410 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 UNKLQ9H9P5 680 aaKnown RBP11.2□□□□□ -0.62
SHC1-210ENST00000448116 TUBD1Q9UJT1 453 aa11.2□□□□□ -0.62
SHC1-210ENST00000448116 NSG1A0A0A6YYJ2 146 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 LY6G6EA0A0G2JKS1 128 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 COLCA2A8K830 154 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 C9J4A7 227 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 SPINK2P20155 84 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 CHATP28329 748 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 RGS19P49795 217 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 TDHQ8IZJ6 230 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 ANGPTL4Q9BY76 406 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 BCO1Q9HAY6 547 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 ZNF286AQ9HBT8 521 aa11.19□□□□□ -0.62
SHC1-210ENST00000448116 PROK2Q9HC23 129 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms