RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 FAM90A22PA8MWA6 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A12PA8MX19 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A5PA8MXJ8 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A23PA8MXZ1 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 LYNX1G3V0Z9 82 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.41■□□□□ 0.22
SGCE-207ENST00000447873 OR7C1O76099 320 aaPredicted RBP16.41■□□□□ 0.22
SGCE-207ENST00000447873 F12P00748 615 aaPredicted RBP16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A15PP0C7V4 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A13PP0C7W8 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A14PP0C7W9 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A24PP0C7X0 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 LYNX1P0DP58 116 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 DAOP14920 347 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 BLVRBP30043 206 aaPredicted RBP16.41■□□□□ 0.22
SGCE-207ENST00000447873 EFNA4P52798 201 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 ZNF45Q02386 682 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 IKZF1Q13422 519 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 IL18Q14116 193 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 IL13RA2Q14627 380 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 ZNF146Q15072 292 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 PDCD1Q15116 288 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 MPV17LQ2QL34 196 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM201AQ5SY85 155 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 SFRP4Q6FHJ7 346 aaPredicted RBP16.41■□□□□ 0.22
SGCE-207ENST00000447873 FAM90A1Q86YD7 464 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 C19orf18Q8NEA5 215 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 NRGNQ92686 78 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 NLKQ9UBE8 527 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 OR14J1Q9UGF5 321 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 GLS2Q9UI32 602 aa16.41■□□□□ 0.22
SGCE-207ENST00000447873 TRAV18A0A075B6X5 111 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 CLDN25C9JDP6 229 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 ZNF205O95201 554 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 KNG1P01042 644 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 CD80P33681 288 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 SCN1BQ07699 218 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 BAIAP2L2Q6UXY1 529 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 YIPF5Q969M3 257 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 RAB3CQ96E17 227 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 NUDT16L1Q9BRJ7 211 aaKnown RBP16.4■□□□□ 0.22
SGCE-207ENST00000447873 V9GYH0 126 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 SPG11Q96JI7 2443 aa16.4■□□□□ 0.22
SGCE-207ENST00000447873 IGHV3OR15-7A0A075B7D8 119 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 A0A0G2JMP0 313 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 A0A0X1KG70 313 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 H3BUI4 141 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 SH2D1BO14796 132 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 NR4A2P43354 598 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 TAS2R20P59543 309 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 MICBQ29980 383 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 NKAPLQ5M9Q1 402 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 ATAD3CQ5T2N8 411 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 Q6ZTK2 550 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 MFSD4AQ8N468 514 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 OR4M2Q8NGB6 313 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 OR5T2Q8NGG2 359 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 NEDD4LQ96PU5 975 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 WDR12Q9GZL7 423 aaKnown RBP16.39■□□□□ 0.21
SGCE-207ENST00000447873 ZNF581Q9P0T4 197 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 RABL2AQ9UBK7 228 aaPredicted RBP16.39■□□□□ 0.21
SGCE-207ENST00000447873 RABL2BQ9UNT1 228 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 WIPI2Q9Y4P8 454 aa16.39■□□□□ 0.21
SGCE-207ENST00000447873 PPIAL4EA0A075B759 164 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 OOEPA6NGQ2 149 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 RFPL4AA6NLU0 287 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 OR2AT4A6NND4 320 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PPIAL4DF5H284 164 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 RFPL4AL1F8VTS6 287 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 DEGS1O15121 323 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 NDUFS7O75251 213 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 HAND1O96004 215 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 INHBBP09529 407 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PPIAL4FP0DN26 164 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 ZNF44P15621 663 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 MUC1P15941 1255 aaPredicted RBP16.38■□□□□ 0.21
SGCE-207ENST00000447873 KRTAP10-9P60411 292 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PLAC9Q5JTB6 97 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 SIGIRRQ6IA17 410 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 DEFB108BQ8NET1 73 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 ARHGAP5-AS1Q96IT6 56 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 SOSTQ9BQB4 213 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 ZMAT3Q9HA38 289 aaKnown RBP16.38■□□□□ 0.21
SGCE-207ENST00000447873 PLEKHJ1Q9NW61 149 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PPIAL4AQ9Y536 164 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 FBN2P35556 2912 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 FOXI3A8MTJ6 420 aaPredicted RBP16.38■□□□□ 0.21
SGCE-207ENST00000447873 LGALS8O00214 317 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 RP2O75695 350 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PSG2P11465 335 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 GNB3P16520 340 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 FUT3P21217 361 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PTBP1P26599 531 aaKnown RBP eCLIP16.38■□□□□ 0.211e-6■■■□□ 14.7
SGCE-207ENST00000447873 MNDAP41218 407 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 TMEM50BP56557 158 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PITPNAQ00169 270 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 ZNF846Q147U1 533 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 TEX36Q5VZQ5 186 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PYHIN1Q6K0P9 492 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 PEG10Q86TG7 708 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms