RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 IGKV1D-12P01611 117 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 CRYBA1P05813 215 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 CCDC159P0C7I6 412 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 OCM2P0CE71 109 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 OCMP0CE72 109 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-203ENST00000444440 ZNF20P17024 532 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 MYL12AP19105 171 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 COX7A1P24310 79 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 PROK1P58294 105 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 CNN3Q15417 329 aaKnown RBP8.84□□□□□ -0.99
SF3A1-203ENST00000444440 SMN1Q16637 294 aaKnown RBP8.84□□□□□ -0.99
SF3A1-203ENST00000444440 NCR3LG1Q68D85 454 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 HIST2H2BDQ6DRA6 164 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 C17orf107Q6ZR85 190 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 LHFPL4Q7Z7J7 247 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 TPRX1Q8N7U7 411 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 OR52N4Q8NGI2 321 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 OR4F5Q8NH21 305 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 OR5AK2Q8NH90 309 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 BORCS8Q96FH0 119 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 CITED1Q99966 193 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 JAM3Q9BX67 310 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 COMMD4Q9H0A8 199 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 VCX3BQ9H321 246 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 VPREB3Q9UKI3 123 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 CAB39Q9Y376 341 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-203ENST00000444440 FAM96BQ9Y3D0 163 aa8.84□□□□□ -0.99
SF3A1-203ENST00000444440 TRBV2A0A0J9YWF9 115 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 CLPSL1A2RUU4 121 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 EFCAB10A6NFE3 127 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 TMEM212A6NML5 194 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 H0YJX3 145 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 H3BUX3 64 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 WIPF1O43516 503 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 PSPNO60542 156 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 ATF1P18846 271 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 PRKACBP22694 351 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 EEF1B2P24534 225 aaKnown RBP8.83□□□□□ -1
SF3A1-203ENST00000444440 AZGP1P25311 298 aaKnown RBP8.83□□□□□ -1
SF3A1-203ENST00000444440 DUSP1P28562 367 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 POU3F4P49335 361 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 ATP1B3P54709 279 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 SNU13P55769 128 aaKnown RBP8.83□□□□□ -1
SF3A1-203ENST00000444440 ACSM1Q08AH1 577 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 XAF1Q6GPH4 301 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 UTS2BQ765I0 119 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 ASCC1Q8N9N2 400 aaKnown RBP8.83□□□□□ -1
SF3A1-203ENST00000444440 ZSCAN4Q8NAM6 433 aaPredicted RBP8.83□□□□□ -1
SF3A1-203ENST00000444440 BEND2Q8NDZ0 799 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 DNAAF1Q8NEP3 725 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 OR13C3Q8NGS6 347 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 PPP1R35Q8TAP8 253 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 CNIH3Q8TBE1 160 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 PIFOQ8TCI5 191 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 EMG1Q92979 244 aaKnown RBP8.83□□□□□ -1
SF3A1-203ENST00000444440 TMEM80Q96HE8 168 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 CHST6Q9GZX3 395 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 DPAGT1Q9H3H5 408 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 BEX1Q9HBH7 125 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 EXOSC1Q9Y3B2 195 aaKnown RBP8.83□□□□□ -1
SF3A1-203ENST00000444440 RNF114Q9Y508 228 aa8.83□□□□□ -1
SF3A1-203ENST00000444440 C17orf98A8MV24 154 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 PLXNB1O43157 2135 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 KCNAB3O43448 404 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 HAND1O96004 215 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 CYB5AP00167 134 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 JUNBP17275 347 aaPredicted RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 RBP2P50120 134 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 GTF2A1P52655 376 aaPredicted RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 RPL15P61313 204 aaKnown RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 BLMHQ13867 455 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 EDDM3AQ14507 147 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 LY6EQ16553 131 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 CCDC58Q4VC31 144 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 ASPHD2Q6ICH7 369 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 RPL22L1Q6P5R6 122 aaKnown RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 BAIAP2L2Q6UXY1 529 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 OR8H2Q8N162 312 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 OR4S1Q8NGB4 309 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 OR5D18Q8NGL1 313 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 OR5D14Q8NGL3 314 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 OR5D13Q8NGL4 314 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 OR13C9Q8NGT0 318 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 RGP1Q92546 391 aaPredicted RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 SSX3Q99909 188 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 PDCD1LG2Q9BQ51 273 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 FAM234AQ9H0X4 552 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 PPA2Q9H2U2 334 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 CNOT2Q9NZN8 540 aaKnown RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 NKX1-2Q9UD57 310 aaPredicted RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 DIMT1Q9UNQ2 313 aaKnown RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 SIGLEC9Q9Y336 463 aa8.82□□□□□ -1
SF3A1-203ENST00000444440 SF3B6Q9Y3B4 125 aaKnown RBP8.82□□□□□ -1
SF3A1-203ENST00000444440 ODF3BA8MYP8 253 aa8.81□□□□□ -1
SF3A1-203ENST00000444440 CHST1O43916 411 aa8.81□□□□□ -1
SF3A1-203ENST00000444440 MMP23AO75900 390 aa8.81□□□□□ -1
SF3A1-203ENST00000444440 TSPAN9O75954 239 aa8.81□□□□□ -1
SF3A1-203ENST00000444440 CLPXO76031 633 aa8.81□□□□□ -1
SF3A1-203ENST00000444440 ZFPL1O95159 310 aa8.81□□□□□ -1
SF3A1-203ENST00000444440 PAHP00439 452 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms