RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 FCGR1BQ92637 280 aa10.22□□□□□ -0.77
USP1-203ENST00000442679 FAM192AQ9GZU8 254 aa10.22□□□□□ -0.77
USP1-203ENST00000442679 PPIL3Q9H2H8 161 aaKnown RBP10.22□□□□□ -0.77
USP1-203ENST00000442679 ELL3Q9HB65 397 aaPredicted RBP10.22□□□□□ -0.77
USP1-203ENST00000442679 RHOFQ9HBH0 211 aa10.22□□□□□ -0.77
USP1-203ENST00000442679 TCF7L1Q9HCS4 588 aa10.22□□□□□ -0.77
USP1-203ENST00000442679 HMG20AQ9NP66 347 aa10.22□□□□□ -0.77
USP1-203ENST00000442679 IL36RNQ9UBH0 155 aa10.22□□□□□ -0.77
USP1-203ENST00000442679 SLC25A10Q9UBX3 287 aaPredicted RBP10.22□□□□□ -0.77
USP1-203ENST00000442679 GLS2Q9UI32 602 aa10.22□□□□□ -0.77
USP1-203ENST00000442679 ING4Q9UNL4 249 aa10.22□□□□□ -0.77
USP1-203ENST00000442679 SF3B6Q9Y3B4 125 aaKnown RBP10.22□□□□□ -0.77
USP1-203ENST00000442679 SETD2Q9BYW2 2564 aaPredicted RBP10.22□□□□□ -0.77
USP1-203ENST00000442679 MEGF11A6BM72 1044 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 ENSAO43768 121 aaKnown RBP10.21□□□□□ -0.77
USP1-203ENST00000442679 CDRT1O95170 752 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 TNFAIP8O95379 198 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 AVPP01185 164 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 CHRM2P08172 466 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 UCHL1P09936 223 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 SRMP19623 302 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 DUSP1P28562 367 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 SRP14P37108 136 aaKnown RBP10.21□□□□□ -0.77
USP1-203ENST00000442679 CAV3P56539 151 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 FABP5Q01469 135 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 COL10A1Q03692 680 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 PAX8Q06710 450 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 ZNF146Q15072 292 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 SPIN3Q5JUX0 258 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 ASCL4Q6XD76 172 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 C1orf229Q6ZS94 237 aaPredicted RBP10.21□□□□□ -0.77
USP1-203ENST00000442679 CDH26Q8IXH8 852 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 H1FXQ92522 213 aaKnown RBP10.21□□□□□ -0.77
USP1-203ENST00000442679 PHYHIPQ92561 330 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 DACT3Q96B18 629 aaPredicted RBP10.21□□□□□ -0.77
USP1-203ENST00000442679 S100A13Q99584 98 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 MRI1Q9BV20 369 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 SLITRK2Q9H156 845 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 METTL9Q9H1A3 318 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 SEBOXQ9HB31 216 aaPredicted RBP10.21□□□□□ -0.77
USP1-203ENST00000442679 NDUFB11Q9NX14 153 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 OPN4Q9UHM6 478 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 RPUSD1Q9UJJ7 312 aaKnown RBP10.21□□□□□ -0.77
USP1-203ENST00000442679 GSTK1Q9Y2Q3 226 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 AUP1Q9Y679 476 aa10.21□□□□□ -0.77
USP1-203ENST00000442679 CCRL2O00421 344 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 SH2D1BO14796 132 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 ARL6IP5O75915 188 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 HAND1O96004 215 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 LIPFP07098 398 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 HOXB4P17483 251 aaPredicted RBP10.2□□□□□ -0.78
USP1-203ENST00000442679 ADRA2CP18825 462 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 MTNR1BP49286 362 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 BMXP51813 675 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 SCN1BQ07699 218 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 NEDD8Q15843 81 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 ELP2Q6IA86 826 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 LRRTM1Q86UE6 522 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 TEX29Q8N6K0 151 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 NKAIN3Q8N8D7 197 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 ASCC1Q8N9N2 400 aaKnown RBP10.2□□□□□ -0.78
USP1-203ENST00000442679 TSPAN14Q8NG11 270 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 OR10K1Q8NGX5 313 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 MUL1Q969V5 352 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 NR1H4Q96RI1 486 aaPredicted RBP10.2□□□□□ -0.78
USP1-203ENST00000442679 DCTN5Q9BTE1 182 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 CNTD2Q9H8S5 307 aa10.2□□□□□ -0.78
USP1-203ENST00000442679 A0A087WXM4 84 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 K7N7A8 449 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 HTR3BO95264 441 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 TK1P04183 234 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 PPIAL4GP0DN37 164 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 SRD5A1P18405 259 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 GABRR1P24046 479 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 CALRP27797 417 aaKnown RBP10.19□□□□□ -0.78
USP1-203ENST00000442679 FGF12P61328 243 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 GLIPR1L1Q6UWM5 242 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 LYPD6Q86Y78 171 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 LY6G5BQ8NDX9 201 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 Q8NFD4 153 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 FOXRED1Q96CU9 486 aaPredicted RBP10.19□□□□□ -0.78
USP1-203ENST00000442679 SNX22Q96L94 193 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 UQCC2Q9BRT2 126 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 FAM234AQ9H0X4 552 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 EXOSC4Q9NPD3 245 aaKnown RBP10.19□□□□□ -0.78
USP1-203ENST00000442679 PCDHB16Q9NRJ7 776 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 IL36GQ9NZH8 169 aa10.19□□□□□ -0.78
USP1-203ENST00000442679 MRPS28Q9Y2Q9 187 aaKnown RBP10.19□□□□□ -0.78
USP1-203ENST00000442679 FN1P02751 2386 aaKnown RBP10.19□□□□□ -0.78
USP1-203ENST00000442679 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.19□□□□□ -0.787e-7■□□□□ 8.9
USP1-203ENST00000442679 MALRD1Q5VYJ5 2156 aa10.18□□□□□ -0.78
USP1-203ENST00000442679 TRDV1A0A1B0GX56 115 aa10.18□□□□□ -0.78
USP1-203ENST00000442679 TMEM82A0PJX8 343 aa10.18□□□□□ -0.78
USP1-203ENST00000442679 SIRPB1O00241 398 aa10.18□□□□□ -0.78
USP1-203ENST00000442679 DEGS1O15121 323 aa10.18□□□□□ -0.78
USP1-203ENST00000442679 ZNF780AO75290 641 aaPredicted RBP10.18□□□□□ -0.78
USP1-203ENST00000442679 ZNF737O75373 536 aa10.18□□□□□ -0.78
USP1-203ENST00000442679 CSTBP04080 98 aaKnown RBP10.18□□□□□ -0.78
USP1-203ENST00000442679 FAM157CP0CG43 387 aa10.18□□□□□ -0.78
USP1-203ENST00000442679 ARF6P62330 175 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms