RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 SSC4DQ8WTU2 575 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 SNX22Q96L94 193 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 FAAP24Q9BTP7 215 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 WWTR1Q9GZV5 400 aa17.7■□□□□ 0.42
SHOX2-203ENST00000441443 ELOA3CA0A087WX78 387 aaPredicted RBP17.69■□□□□ 0.42
SHOX2-203ENST00000441443 GABREP78334 506 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 ICAM4Q14773 271 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 TGIF2LXQ8IUE1 241 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 MVB12AQ96EY5 273 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 FOXD3Q9UJU5 478 aaPredicted RBP17.69■□□□□ 0.42
SHOX2-203ENST00000441443 SLC33A1O00400 549 aaPredicted RBP17.69■□□□□ 0.42
SHOX2-203ENST00000441443 ONECUT2O95948 504 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 JMJD7P0C870 316 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 DUSP1P28562 367 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 GLIPR1P48060 266 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 ZP4Q12836 540 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 HIST2H3PS2Q5TEC6 136 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 MEX3BQ6ZN04 569 aaKnown RBP17.69■□□□□ 0.42
SHOX2-203ENST00000441443 SYT13Q7L8C5 426 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 DYRK2Q92630 601 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 PGA4P0DJD7 388 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 PGA5P0DJD9 388 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 CLRN1P58418 232 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 IL13RA2Q14627 380 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 BRICD5Q6PL45 260 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 DTX1Q86Y01 620 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 SLC38A9Q8NBW4 561 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 POM121Q96HA1 1249 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 FAM210BQ96KR6 192 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 HIST1H2BLQ99880 126 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 SMDT1Q9H4I9 107 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 MOB1AQ9H8S9 216 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 SERINC1Q9NRX5 453 aa17.69■□□□□ 0.42
SHOX2-203ENST00000441443 FAM221AA4D161 298 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 SCAF4O95104 1147 aaKnown RBP17.68■□□□□ 0.42
SHOX2-203ENST00000441443 FAHP16930 419 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 ECI1P42126 302 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.68■□□□□ 0.42
SHOX2-203ENST00000441443 DOK3Q7L591 496 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 DPPA2Q7Z7J5 298 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 C17orf78Q8N4C9 275 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 SLC7A11Q9UPY5 501 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 CCDC163A0A0D9SF12 145 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 CA5BP1Q8WTZ4 195 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 BOD1Q96IK1 185 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 SLC25A31Q9H0C2 315 aa17.68■□□□□ 0.42
SHOX2-203ENST00000441443 CCDC187A0A096LP49 1063 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 SMCO3A2RU48 225 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 GNMTQ14749 295 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 NSDHLQ15738 373 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 LIAT1Q6ZQX7 453 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 C20orf196Q8IYI0 205 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 FBXL14Q8N1E6 418 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 KIAA1456Q9P272 454 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 PHF1O43189 567 aaPredicted RBP17.67■□□□□ 0.42
SHOX2-203ENST00000441443 IFNA10P01566 189 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 FASLGP48023 281 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 RUNX1Q01196 453 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 CHAF1BQ13112 559 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 OR2C3Q8N628 320 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 TMEM171Q8WVE6 324 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 C18orf12Q96KH6 178 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 SLC2A9Q9NRM0 540 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 SHANK1Q9Y566 2161 aa17.67■□□□□ 0.42
SHOX2-203ENST00000441443 A0A087WZY1 265 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 IGSF23A1L1A6 192 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 RRP8O43159 456 aaKnown RBP17.66■□□□□ 0.42
SHOX2-203ENST00000441443 CASP6P55212 293 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 OR14L1PQ8NHC6 308 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 M1APQ8TC57 530 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 THAP3Q8WTV1 239 aaPredicted RBP17.66■□□□□ 0.42
SHOX2-203ENST00000441443 LYZL4Q96KX0 146 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 HSF4Q9ULV5 492 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 GEMIN2O14893 280 aaKnown RBP17.66■□□□□ 0.42
SHOX2-203ENST00000441443 CD27P26842 260 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 SFTPDP35247 375 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 TAF9Q16594 264 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 MSI2Q96DH6 328 aaKnown RBP17.66■□□□□ 0.42
SHOX2-203ENST00000441443 MAGT1Q9H0U3 335 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 DECR2Q9NUI1 292 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 B3GAT1Q9P2W7 334 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 WDFY4Q6ZS81 3184 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 BTF3P20290 206 aaKnown RBP17.66■□□□□ 0.42
SHOX2-203ENST00000441443 SPCS3P61009 180 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 BEND4Q6ZU67 534 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 TMEM217Q8N7C4 229 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 SLC35G3Q8N808 338 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 TMEM234Q8WY98 164 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 PGAM5Q96HS1 289 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 MRPL13Q9BYD1 178 aaKnown RBP17.66■□□□□ 0.42
SHOX2-203ENST00000441443 SIRT7Q9NRC8 400 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 WASF3Q9UPY6 502 aa17.66■□□□□ 0.42
SHOX2-203ENST00000441443 TCAPO15273 167 aa17.65■□□□□ 0.42
SHOX2-203ENST00000441443 ANGPTL7O43827 346 aa17.65■□□□□ 0.42
SHOX2-203ENST00000441443 FUT3P21217 361 aa17.65■□□□□ 0.42
SHOX2-203ENST00000441443 DCAF7P61962 342 aa17.65■□□□□ 0.42
SHOX2-203ENST00000441443 RPL23AP62750 156 aaKnown RBP17.65■□□□□ 0.42
SHOX2-203ENST00000441443 NAXEQ8NCW5 288 aa17.65■□□□□ 0.42
SHOX2-203ENST00000441443 C2orf88Q9BSF0 95 aa17.65■□□□□ 0.42
SHOX2-203ENST00000441443 PNRC2Q9NPJ4 139 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms