RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 APLNRP35414 380 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 RPL18AQ02543 176 aaKnown RBP1.89□□□□□ -2.11
VPS41-207ENST00000439468 INCA1Q0VD86 236 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 NAB1Q13506 487 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 WDR43Q15061 677 aaKnown RBP eCLIP1.89□□□□□ -2.11
VPS41-207ENST00000439468 LUZP6Q538Z0 58 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 STEAP4Q687X5 459 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 DAW1Q8N136 415 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 MIR7-3HGQ8N6C7 128 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 TMEM104Q8NE00 496 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 OR1L1Q8NH94 360 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 RTN4IP1Q8WWV3 396 aaPredicted RBP1.89□□□□□ -2.11
VPS41-207ENST00000439468 ZFP3Q96NJ6 502 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 RDH12Q96NR8 316 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 TMEM175Q9BSA9 504 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 IL22Q9GZX6 179 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 ARV1Q9H2C2 271 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 CA10Q9NS85 328 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 TAS2R5Q9NYW4 299 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 CHD7Q9P2D1 2997 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 NDRG2Q9UN36 371 aaKnown RBP1.89□□□□□ -2.11
VPS41-207ENST00000439468 PPIL1Q9Y3C6 166 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 FAM186AA6NE01 2351 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 GVINP1Q7Z2Y8 2422 aa1.89□□□□□ -2.11
VPS41-207ENST00000439468 MGAMO43451 1857 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 PLXNA1Q9UIW2 1896 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 ITPR3Q14573 2671 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 ABCC11Q96J66 1382 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 WDR87Q6ZQQ6 2873 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 ZNF701M0R085 212 aaPredicted RBP1.88□□□□□ -2.11
VPS41-207ENST00000439468 CCDC22O60826 627 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 SMC2O95347 1197 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 ARL2P36404 184 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 IFITM3Q01628 133 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 KLHL12Q53G59 568 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 EPGNQ6UW88 154 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 NDUFAF7Q7L592 441 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 OR2W3Q7Z3T1 314 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 VTCN1Q7Z7D3 282 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 LINC00523Q86TU6 105 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 ZCCHC24Q8N2G6 241 aaKnown RBP1.88□□□□□ -2.11
VPS41-207ENST00000439468 SPANXA2-OT1Q8N9U9 137 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 OR9A2Q8NGT5 310 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 S100PBPQ96BU1 408 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 GPR82Q96P67 336 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 TEAD3Q99594 435 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 NAPGQ99747 312 aaPredicted RBP1.88□□□□□ -2.11
VPS41-207ENST00000439468 SFXN3Q9BWM7 321 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 ZNF717Q9BY31 904 aaPredicted RBP1.88□□□□□ -2.11
VPS41-207ENST00000439468 TOLLIPQ9H0E2 274 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 ARMC7Q9H6L4 198 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 HEBP1Q9NRV9 189 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 TREX1Q9NSU2 369 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 VAX2Q9UIW0 290 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 PIK3C2GO75747 1445 aa1.88□□□□□ -2.11
VPS41-207ENST00000439468 COL1A2P08123 1366 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 CFAP46Q8IYW2 2715 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 FRYLO94915 3013 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 TRAV6A0A075B6T7 132 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 IGKV1-6A0A0C4DH72 117 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 A0A1B0GUH1 482 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 CEACAM18A8MTB9 384 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 DFFAO00273 331 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 PSPHP1O15172 72 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 GMDSO60547 372 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 CNMDO75829 334 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 PTHP01270 115 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 GCGP01275 180 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 IGKV1-39P01597 117 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 IGKV1D-39P04432 117 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 CRYGCP07315 174 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 HSPD1P10809 573 aaKnown RBP1.87□□□□□ -2.11
VPS41-207ENST00000439468 PRKACAP17612 351 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 CXCR1P25024 350 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 IL3RAP26951 378 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 FBN2P35556 2912 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 GALR1P47211 349 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 RBX1P62877 108 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 SLC35A1P78382 337 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 IFFO1Q0D2I5 559 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 NDUFAF6Q330K2 333 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 DNLZQ5SXM8 178 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 C6orf183Q5T699 404 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 FAM222AQ5U5X8 452 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 TMPRSS11AQ6ZMR5 421 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 SLC35G3Q8N808 338 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 GATSQ8NAP1 163 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 TMEM234Q8WY98 164 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 Q96MT0 163 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 IP6K3Q96PC2 410 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 ALS2CR12Q96Q35 445 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 SULT4A1Q9BR01 284 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 CHCHD7Q9BUK0 85 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 TEX15Q9BXT5 2789 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 ZSCAN16Q9H4T2 348 aaPredicted RBP1.87□□□□□ -2.11
VPS41-207ENST00000439468 KIR3DX1Q9H7L2 352 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 PLEKHF2Q9H8W4 249 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 LINC00574Q9H8X3 128 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 ITPR1Q14643 2758 aa1.87□□□□□ -2.11
VPS41-207ENST00000439468 RIF1Q5UIP0 2472 aaKnown RBP1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms